KEGG   Pseudomonas putida H8234: L483_06285
Entry
L483_06285        CDS       T02706                                 
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
pput  Pseudomonas putida H8234
Brite
KEGG Orthology (KO) [BR:pput00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pput03016]
    L483_06285
Enzymes [BR:pput01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     L483_06285
Transfer RNA biogenesis [BR:pput03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    L483_06285
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_8 Pyr_redox FAD_binding_3 FAD_binding_2 Pyr_redox_2 3HCDH_N GIDA FAD_oxidored Shikimate_DH ApbA Sacchrp_dh_NADP HI0933_like TrkA_N AlaDh_PNT_C Thi4 NAD_binding_9 NAD_binding_2 Glu_dehyd_C UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AGN81435
Position
complement(1359792..1361756)
AA seq 654 aa
MSTLLQHAQIDWDDQGRPHSRQYDDVYFAVNEGIEETKHVFLGQTRLAERFANLAPHACK
VIGETGFGTGMNFFCAWQLFDQHAHRDARLHFVSVEKYPLGHEDMARAVRLWPELAAYTE
PLLAQYVAVHPGFQQFTFADGRVTLTLLIGDVLEQLPQLDAQVDVWFLDGFAPAKNPDMW
TPELFGQLARLSHPGTVLGTFTTTGWVRRSLVDAGFAMKKVPGIGKKWEVMSGAYVGPQS
SPGAPWYARPAVTQGPREALVIGAGLAGSTTAASLARRGWQVTVVERHDAPAQEASGNPQ
GVLYLKLSAHGTALSQVILSGFGYTRRQLERLQRGRDWDACGVLQLAFDSKEAERQGKLA
AAFDHNLLHALPRTEAEAVAGVALPAGGLFYPEGGWVHPPALCQKQLQHPGIRLVTHQEV
LELRKVDQQWLAWAGDRLIASAPVVILASAAEVKRFEPCAQLPLKRIRGQITRLPATASS
RALRTVVCAEGYVAPPREDEHTLGASFDFHSEDLAPTVAEHQGNLALLNEISLDLAQRLG
TVGLAPEQLQGRAAFRCTSPDYLPIVGPVADGQAFAETYAVLSRDARQVPDVACPWLDGL
YVNSGHGSRGLITAPLSGELVAAWVCGEPLPLPRAVAEACHPNRFALRKLIRGK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgtccaccctcctccagcacgcacaaatcgactgggacgaccagggccgcccccactcg
cggcaatatgacgacgtctatttcgcggtcaacgaaggcatcgaagaaaccaagcatgtg
ttcctgggccagacccgcctggccgagcgctttgccaacctggcgccgcatgcctgcaag
gtgatcggcgaaaccggttttggcaccggcatgaattttttctgcgcctggcagctgttt
gaccagcacgcgcaccgcgacgcccgcctgcacttcgtcagtgtcgagaaataccctctc
gggcacgaagacatggcccgggcagtgcgcctttggccggagcttgccgcctacacagag
ccattgctggcgcaatatgtggcagtgcacccgggctttcagcagttcaccttcgccgat
ggccgggtcaccctgaccttgctgatcggcgacgtacttgagcaactgccgcaactcgat
gcgcaggtcgatgtgtggttcctcgatggcttcgcccctgccaaaaaccccgacatgtgg
accccggaactgttcgggcaactggcgcggttgtcgcacccgggcactgtgctgggcacc
ttcaccactaccggctgggtccgccgcagcctggtcgacgccggtttcgccatgaagaag
gtgccgggcatcggcaagaagtgggaagtgatgagcggcgcctacgtcggcccacagtcc
agcccaggggcaccttggtacgcgcgtcccgccgttacacagggaccgcgcgaggcgctg
gtgatcggtgccgggctcgccggcagcacaacggccgccagcctggcccgacgcggctgg
caggtgaccgtggtggagcgccacgatgccccggcacaggaagcttcaggcaacccgcaa
ggggtgctgtacctcaagctgtctgcccatggcactgcgctgtcgcaggtgatcctgtcc
ggtttcggctacacccggcgccagcttgaacgcctgcagcgtggccgcgactgggatgct
tgcggggtgctgcaactggccttcgacagcaaggaagctgagcgccagggcaagctggcc
gccgccttcgaccacaacctgctgcacgcactgccgcgcacggaggccgaagccgtcgcc
ggggtggcgttaccggccggggggttgttctaccccgaaggcggctgggtgcatccacct
gcgttgtgccagaagcaactgcagcacccagggattcgactggtcacccatcaggaagtg
ctcgagctgcgcaaggtcgaccagcagtggctggcttgggcgggtgaccgcctgatcgcc
agcgcgcccgtggtgattctggccagtgccgccgaggtaaagcgcttcgagccttgcgcg
cagctgccgctcaagcgcatccgggggcagatcacccgcttgccggccaccgccagcagc
cgggcactgcgcaccgtggtgtgcgcggagggctacgtggcgccgccacgcgaggatgaa
cataccctcggcgcgagctttgacttccacagcgaagacttggcgccgacggtggccgag
caccagggcaacctggcgttgctgaacgagatttccctcgacctggcgcagcgcctgggc
acagttgggttggcccctgagcagttgcaggggcgcgcggcgttccgttgtaccagcccg
gactacctgccgatcgtggggccggtagcggatggacaggcatttgccgaaacctatgcg
gtgctgagccgggatgcgcggcaggtgccggatgtggcctgcccttggctggatgggttg
tacgtgaacagcgggcatgggtcgcgcgggttgatcacggcgccactgagtggcgagctg
gtggcggcctgggtatgtggggagccgctgccgttgccccgggcagtggcagaggcgtgt
catccgaaccggtttgccttgcgtaagctgattcgggggaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (40)   

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