KEGG   Pseudomonas putida H8234: L483_20725
Entry
L483_20725        CDS       T02706                                 
Name
(GenBank) conjugative transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
pput  Pseudomonas putida H8234
Pathway
pput02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pput00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    L483_20725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pput02044]
    L483_20725
Secretion system [BR:pput02044]
 Type IV secretion system
  Trb secretion system protein
   L483_20725
SSDB
Motif
Pfam: TrbI DUF4307
Other DBs
NCBI-ProteinID: AGN82898
Position
complement(4362149..4363432)
AA seq 427 aa
MSQDDTPDLAAPQAAGKIAPEAVALRAQPRPVTRLNRRTLAILAGVLAVAVLGAVMWSLQ
PQRRGAGEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPAVPELGPPLPGDLGPAIVKS
QQPATAAYAAPGHDPNDALRKEAEAAAASSVFFRSGGQNAAPVAQTQVAAAPGFAANAVF
DPLAAGPVSTAAQPADPTAVQNRQDHKEAFLKGGSTETRNSGNLTLPTSPYQVMAGTVVA
GALVTGIKSDLPGDVIATVTEPVYDTASGRFLLIPQGSRILGKYNSQVSYGQSRVQVVWN
RIILPDTSSLTLDNLAGTDPAGYAGLEDDVDYHWGRIFAGAALTTLLGVGAELAAPENRQ
DGDRVIIAGRDSAQDSINQVGQEMTRRNLNIQPTLTQRPGLPVRIIVNRDLVLRRYQPLF
FNRGTSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgagccaggatgacactcccgaccttgccgcgccgcaggcggcgggcaagatcgctccc
gaggcggtcgcgcttcgcgcccagccgcgcccggtcacgcgcctgaatcggcgcacgctg
gccatcctcgccggcgtcctggcggtggccgtgctcggcgcggtgatgtggtcgctgcaa
cctcagcggcgcggtgcgggcgagcagaccgagctttacaacgtcgatcgtgtctcgaag
tctgaaggactggatgcgctgccgacggactactccaagctgccgccggcgttgccgcct
gccgttcccgaactggggccgccgctgccgggcgatcttggcccggccatcgtgaagtcg
cagcagccggcgacggccgcctacgcggcccccggccacgacccgaacgatgctctgcgc
aaagaagccgaagcggccgcggcctcgtccgtgttcttccgctcgggagggcagaatgcg
gcgccggtggcgcagacacaggtggccgctgcgccgggcttcgccgccaatgcggtgttt
gacccgctggcggccgggccggtctccacggcggcccagcctgctgacccgacagcggtg
caaaaccggcaagaccataaagaggctttcttgaaaggtggctccactgaaacccgtaat
tccggcaatctgaccctgccaacttcgccgtatcaggtcatggccggaacggtggtcgca
ggtgccttggtgacggggattaagtcggacttgcccggcgacgtgatcgccacggtgacg
gagccggtctatgacacagcctccgggcgcttcctgctgattccgcagggttcgcgcatc
ctgggcaaatacaacagccaggtcagctacgggcagagccgcgttcaagtcgtctggaac
cggatcatcctgccggacacgtcttcgctcacgctcgacaacctggccggcaccgaccca
gccggctatgccgggctggaggacgatgtggactaccactggggccgcatctttgccggt
gcggcactcaccacgctgctgggcgtcggtgccgagctggccgcgccggagaaccggcag
gatggtgatcgcgtcatcatcgctgggcgcgacagcgcgcaggacagcatcaatcaggtc
ggccaggagatgacccggcgcaacctcaacatccagccgaccttaacgcaacggccgggc
ctgccggttcgcatcatcgtcaaccgggatctggtgctgcggcggtaccagccgctgttc
ttcaaccgggggacttcacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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