KEGG   Pseudomonas putida H8234: L483_30760Help
Entry
L483_30760        CDS       T02706                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pput  Pseudomonas putida H8234
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pput00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    L483_30760
Enzymes [BR:pput01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     L483_30760
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     L483_30760
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6520390..6521202)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAARHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFAYGR
GGQPCKVCGTELREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccggcgcggtatcgcgccccacctggaaggc
cagcgtgtcagccgcgtggtggtgcgtgaccggcgcttgcgttggccaatcccggaagac
ctggacgtgcgcctgtcggggcagcgcattgtcagtgtcgagcggcgcgccaaatacctg
ttgatcaatgccgaggtgggtacgctgatcagccacctgggcatgtcgggcaacttgcgg
ctggtcgaactgggtttgccggcggcccggcatgaacatgtcgacatcgagctggagtcg
gggctgatgctgcgctacaccgacccgcgccgcttcggggccatgctgtggagcctggac
ccgctgaaccacgagctattgctgcgcctcgggccagagccgctgactgatctgtttgac
ggtgagcgcctgttccagctgtcgcgcgggcggtcgatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggggtgggcaacatctacgccactgaagcgctgtttgctgca
ggtatcgacccgcgtcgggaggcgggcgggatttcacgggcgcgctacctgaagctggcg
atcgagatcaagcgggtgctggcggcggcgatcgagcgcggcggtaccaccctgcgcgac
ttcatcgggggcgatgggcagccgggttacttccagcaggaactgtttgcgtacggccgt
ggcgggcagccgtgcaaggtgtgcggcacggagttgcgcgaggtgaagctggggcagcgg
gcgagcgtgtattgcccgcgctgccagcgctaa

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