KEGG   Pseudomonas sp. UW4: PputUW4_04288
Entry
PputUW4_04288     CDS       T02357                                 
Name
(GenBank) radical SAM family protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu00790  Folate biosynthesis
ppuu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    PputUW4_04288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppuu03016]
    PputUW4_04288
Enzymes [BR:ppuu01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     PputUW4_04288
Transfer RNA biogenesis [BR:ppuu03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PputUW4_04288
SSDB
Motif
Pfam: Radical_SAM Fer4_12
Other DBs
NCBI-ProteinID: AFY21480
UniProt: K9NQD3
Position
complement(4926472..4927119)
AA seq 215 aa
MQDTLRITEVFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFTGGTIRTLDDILEQ
VAGFRPRYVCVTGGEPLAQPNAIPLLKRLCDAGYEVSLETSGSIDISPVDSRVSRVVDLK
TPGSKEAHRNRYENIELLTPNDQVKFVICSREDYDWSVSKLIQYGLDQRAGEVLFSPSHH
DLNARDLADWVVADNLPVRLQLQLHKYLWNDEPGR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgcaagacacattgagaatcaccgaagttttctactcgttgcagggtgaaactcggact
gccggcctgcccacggtttttgtgcgcctgaccggttgtccgttgcgttgccaatactgc
gacagcgcctacgcgttcaccggcggaaccattcgcaccctcgacgacatcctcgagcag
gtcgccggtttccgcccgcgttatgtctgtgtcacgggcggcgagcccctggcgcaaccc
aacgccattcccttgctcaagcgcttgtgcgacgccggttacgaagtgtcactggaaacc
agtggctctatcgatatctcgccagtagattcccgggtcagtcgcgttgtcgacctgaaa
accccgggatcgaaggaagcgcaccgcaatcgctacgaaaacatcgagctgctcacgccc
aacgatcaggtgaagtttgtcatctgttcgcgggaggactatgactggtccgtttccaaa
ctgatccagtacggccttgaccagcgcgccggcgaagtcctgttttcgccaagccaccat
gatctcaatgcccgggacctggcggactgggtggtggcggacaacctgccagtgcgtttg
caattgcagctgcataaatatctatggaatgacgagccggggcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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