KEGG   Pseudomonas parafulva: NJ69_12430
Entry
NJ69_12430        CDS       T03520                                 
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ppv  Pseudomonas parafulva
Pathway
ppv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NJ69_12430 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppv03400]
    NJ69_12430 (ruvB)
Enzymes [BR:ppv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NJ69_12430 (ruvB)
DNA repair and recombination proteins [BR:ppv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NJ69_12430 (ruvB)
    RecFOR pathway proteins
     NJ69_12430 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase TIP49 nSTAND3 AAA_3 AAA_16 AAA_17 AAA_14 RNA_helicase AAA_2 Rad17 AAA_18 AAA_28 NTPase_1 ABC_tran NB-ARC AAA_24 TsaE RsgA_GTPase
Other DBs
NCBI-ProteinID: AIZ33733
UniProt: A0A0A7JMA0
Position
complement(2903725..2904771)
AA seq 348 aa
MIEADRLIAASGRDREEVQDRAIRPLSLDDYIGQPVVREQMGLFIQAARGRHESLDHTLI
FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSNQDLATIVSRSAHILGLVIEDKGAFEIARRARGTPRIANRLLRRVRDYAEVRGKG
QISKDIADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRFAEGGEFSDPDDL
NT seq 1047 nt   +upstreamnt  +downstreamnt
gtgatcgaagccgaccgtctcatcgccgccagcgggcgggatcgcgaagaggtccaggac
cgcgccatccgtcctttgagcctggacgactatatcggccagccagtcgtgcgcgagcag
atggggttgttcatccaggccgcgcgcggccgccacgaatcgctcgaccataccctcatc
ttcggtccgccaggtttgggcaagaccacgctggccaatatcatcgcccatgaaatgggc
gtttcggtcaagagcacatccggccccatccttgagcgccctggcgacctggcggcgatg
ctgaccaacctggaaccgcacgatgtgttgttcatcgacgaaatccaccgcctgtctccg
gtggtcgaggaagtgctctatcccgccatggaggatttccagctcgacatcatgatcggt
gaagggccggcggcgcgctcgatcaagctcgacttgccgcccttcacgcttgtcggcgcc
accacgcgcgctggcatgctcaccaatccactgcgcgatcgcttcggtatcgtccagcgc
ctcgagttctacagcaatcaagacctggcaaccatcgtcagccgctccgcgcacattctc
ggtctggtcatcgaagacaagggcgccttcgagatcgcccgtcgtgcccgtggtacgcca
cgtatcgccaatcggctactgcgccgtgtacgtgactatgccgaggttcgcggcaaaggc
cagatcagcaaagacatcgctgacatggcgctcaacctgctggacgtggacgagcgcggt
ttcgatcactccgaccgacgcctgctgctgaccatgatcgagaagttcgacggcggtccg
gtgggcgtcgacaacctggcggcggccatcagcgaggagcgccataccatcgaggatgtg
ctggagccttatctgattcagcagggctatatcatgcgcacgccacgcggtcgtgtggtc
acccgccatgcctacctgcattttggtctgaacattcctggacgctttgccgagggagga
gaattttccgatcctgacgatctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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