KEGG   Pseudomonas putida W619: PputW619_0340Help
Entry
PputW619_0340     CDS       T00675                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppw  Pseudomonas putida W619
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppw00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PputW619_0340
Enzymes [BR:ppw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PputW619_0340
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PputW619_0340
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
359498..360310
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRILSVERRAKYL
LINAEVGTLISHLGMSGNLRLVQLGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRTMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRTRYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGMPCKLCGTTLREAKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattacccgaagtagagaccacgcggcgtggtatcgcgccgcacctggaaggc
cagcgggtcagccgcgtggtggtgagagaccggcgcttgcgctggccaatcccggaggac
ctggacgtgcgtttgtccgggcagcgtattctcagcgtcgagcggcgcgccaaatacctg
ctgatcaatgccgaggtcggcaccttgatcagccatctgggcatgtcgggcaacctgcgt
ctggtgcagctggggctaccggcggccaagcatgagcacgtcgatatcgaactggagtcg
gggctgatgctgcgctacaccgacccacgtcgtttcggtgccatgctctggagccttgat
ccgctcaatcacgagctgctcctgcgtctgggcccagagccgttgaccgacctgttcgac
ggcgagcgcctgtttcagctgtcgcgtgggcggacgatggccgtcaagcctttcatcatg
gataacgcggtggtggtgggcgtgggcaatatctacgcgaccgaggcgctgtttgccgcc
ggtatcgacccacgccgtgaggcgggcggaatctcccgtacccgttacctgaaactggcc
atcgagatcaagcgcgtgctggcggcagccatcgagcaagggggcacgaccttgcgcgat
ttcattggcggcgacggacagccgggttatttccagcaggaactattcgtgtacggccgg
ggcgggatgccttgcaagctgtgcggcactaccttgcgtgaggccaagcttgggcagcgg
gccagcgtttactgcccgcgttgccagcgttga

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