KEGG T00675: PputW619

Pseudomonas putida W619: PputW619_0946

Entry

PputW619_0946 CDS T00675

Gene name

ddl

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

ppw Pseudomonas putida W619

Pathway

ppw00473	D-Alanine metabolism
ppw00550	Peptidoglycan biosynthesis
ppw01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:ppw00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:ppw00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C ATP-grasp_4 Dala_Dala_lig_N CPSase_L_D2 ATPgrasp_Ter ATP-grasp_3 RimK ATP-grasp ATPgrasp_YheCD ATP-grasp_5 GARS_A TTL

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1041424..1042380

AA seq 318 aa
MTSAYEKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIEALSSAGVDVVAIDVGDD
LLARLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASEEDCVVAGTELGFPLIVKPAHEGSSIGMAKVNSERELVAAWQDAAK
YDSQVLVEQWIHGPEFTIAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSA
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILADSVATRG

NT seq 957 nt +upstreamnt +downstreamnt
atgaccagcgcctacgagaagttgcattcaaccctggacgtcaaagcgttcggccgtgtc
gctgtactttacggcggcaagagcgccgagcgtgaagtctcgctcaagtcgggcgctgcc
gtgatcgaggcgctgagcagcgccggtgtcgacgtggtcgccatagacgtgggcgatgac
ctgctggcccgcctgcaaagcgagaagatcgaccgtgccttcatcatcctgcacggccgc
ggcggtgaggacggcagcatgcaaggcctgctggagtgcctgggcattccctacaccggc
agtggcatcctcgcctcggctctggccatggacaagctgcggaccaagcaggtatggcaa
agcttgggcattccgacaccgcgtcacgccgtgctggccagcgaagaagattgtgttgta
gccggtacggaactgggcttcccgctgatcgtcaaacctgcccatgaaggctctagcatc
ggcatggccaaggtgaacagcgagcgggaactggttgctgcctggcaagacgccgccaaa
tacgattctcaggtgctggtcgagcaatggattcacggcccggagttcaccatcgctgtt
ctgcgtggccaggtgctgccgccgatcgccctgggtactccgcacgtgttctacgactac
gacgccaagtacatcgccaatgacacccagtaccgcatcccgtgcggcctggacagtgcc
aaggagcaggagcttatcgacctgaccgcgcgcgcctgcgatgccatcggcatcgaaggc
tggggccgtctggacgtgatgcaggatgagcagggccgattctggctgctcgaagtaaac
accgcaccgggcatgactgatcatagcctggtgcccatggcggcccgcgcggccggtctg
gacttccagcagctggtgctggcgatcctggccgacagcgtagcgacgcgaggttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPW (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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