KEGG   Pseudomonas putida DOT-T1E: T1E_3093
Entry
T1E_3093          CDS       T02181                                 
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
ppx  Pseudomonas putida DOT-T1E
Pathway
ppx00061  Fatty acid biosynthesis
ppx00071  Fatty acid degradation
ppx01100  Metabolic pathways
ppx01212  Fatty acid metabolism
ppx02024  Quorum sensing
Module
ppx_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    T1E_3093 (fadD)
   00071 Fatty acid degradation
    T1E_3093 (fadD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T1E_3093 (fadD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ppx01004]
    T1E_3093 (fadD)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppx04147]
    T1E_3093 (fadD)
Enzymes [BR:ppx01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     T1E_3093 (fadD)
Lipid biosynthesis proteins [BR:ppx01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   T1E_3093 (fadD)
Exosome [BR:ppx04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   T1E_3093 (fadD)
  Exosomal proteins of breast cancer cells
   T1E_3093 (fadD)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2 DUF3710
Other DBs
NCBI-ProteinID: AFO48930
UniProt: I7B1N4
Position
complement(3395899..3397596)
AA seq 565 aa
MIENFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGANLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgatcgaaaatttttggaaggataagtacccagccgggattacggcggaaatcaatcct
gacgaattccccaatatccaggcggtactcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagactatcacttatggcgagttgtatgcgttgtcgggg
gcgtttgccgcctggctgcagcagcataccgacctcaagccgggtgaccgcattgccgtg
caactgcccaatgtcctgcaatacccggtcgcggtcttcggtgccatgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgac
tcgggtgccaaggccctggtgtgcctggccaacatggcccacctggccgaaaaagtggtg
cccaaaacccaggtcaggcacgttatcgtcaccgaagtggccgacctgctgccgccactc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaagatggtgccggcctacaac
ctgccgcaggccgtgcgtttcaatgacgccctggcgctgggcaagggccagccagtgacc
gaggccaacccgcaggccaacgacgtggcggtgctgcaatacaccggcggtaccaccggc
gtggccaaaggcgccatgctgacccatcgcaacctggtggccaacatgctgcagtgccgg
gcactgatgggcgccaacctgcacgaaggctgcgaaatcctcatcactccgctgccgctt
taccacatctatgcgtttaccttccattgcatggcgatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgagacttgccggcgatggtcaaggaactgggcaagtggaag
ttcagcggctttgtgggccttaacaccctgttcgtcgccttgtgcaataacgaggcgttc
cgagccctggatttctcggcgctgaaaatcaccctgtcgggcggcatggccttgcagcta
agcgtggccgagcgctggaaggccgttaccggttgcgccatctgcgaaggctacggcatg
accgaaaccagcccggtggcggcggtgaacccgtcggaagcgaaccaggtgggcaccatc
ggtattccggtgccgtcgaccttgtgcaaggtcatcgacgacgccggcaatgagctgccg
cttggcgaagtgggcgagctgtgtgtcaagggcccgcaggtgatgaagggctactggcag
cgtgaagatgccacggccgagattctcgacagcgaaggctggctgaagaccggtgacatc
gccgtgatccaggcggacggctacatgcgcatcgtcgaccgcaagaaagacatgatcctg
gtctcgggcttcaacgtgtaccccaacgagctggaagacgtgttggcggccttgccgggc
gtgctgcagtgcgctgccatcggtgtgccggacgagaagtcgggtgaagtgatcaaggtc
ttcatcgtggtcaagccgggcatgaccgtgaccaaggagcaggtgatggagcacatgcgt
gccaacgtcaccggttacaaggtaccgcgccacatcgagttccgcgattcgctgcctacc
accaacgtgggcaagatcctgcgccgcgaactgcgtgatgaagagctcaagaagcaaggc
ttgaagaagatcgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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