KEGG   Pseudomonas putida DOT-T1E: T1E_4567
Entry
T1E_4567          CDS       T02181                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ppx  Pseudomonas putida DOT-T1E
Pathway
ppx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    T1E_4567
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppx02044]
    T1E_4567
Secretion system [BR:ppx02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   T1E_4567
SSDB
Motif
Pfam: Phage_GPD Phage_base_V Gp5_C DUF2345 DUF6484
Other DBs
NCBI-ProteinID: AFO50395
UniProt: I7B5H7
Position
complement(4991264..4993432)
AA seq 722 aa
MPSQSDLRYSFEALVGNAEFEVVSFELREGISTPFELELKLISFENDIDFGHLLDKPVLF
TIWEGGRPVRYVHGLVSRFSQAESGFYRTYYDALIEPQLARASLRSNWRIFQQKTVPQIL
ELMLKRQGIDQYALRASLDHQVREFCVQAGETDLDFIARLAAEEGFVYRFEHNEKRHKLI
ITDRLQSLGLISHGVIKHEDDAEGFYREREPSAPDTVLYHSNHGGDQPQPCLRRLRYSEQ
VRTARQVQRDYTFTHPAYHQEHRASGPYLEHQSTDYECFDYPGRYKRDAVGKPFTENRIT
GLRHDVRIAQVQGDDVRLQPGLSFTLTGHPREDLNVHWRVSTVRHEGSQFTSLQEEAAGA
DQGTRYEQKAVLVPGRAEWRPAPLPKPRVDGPHMATVVGPPGEEIYCDEWGRVKVSFPWD
RESQDNAFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQL
PPYDLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGN
DRKEQVDHDESILIGHDRTETVGNDEHITIGQDAALDIGRNHTIRIAKDRVENIGNHRHD
QIAANHHTRIGGNFEQRVEGHAELEARGDIRRRTRRYELRASEAVVIQGPGGSIRIDETG
ITLDSPTIRITGQMLKSANGTTSPFSISSAPNTGKPLERLCGRRPDGSCPLPDCRCIRGP
VQ
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaacgctgagttc
gaagtggtgtcgttcgaactacgagaagggatcagcacacccttcgaactggagctgaaa
ttgatcagcttcgagaacgatatcgacttcggccacctgctcgacaaaccggtgctcttc
accatctgggaaggcggacgcccagtacgctacgtgcacggtctggtcagtcgtttcagc
caagcggaaagtggcttctaccgcacctactatgacgcgctgatcgagccacagctggcc
cgtgccagcctgcgttcgaactggcgcatcttccagcagaagaccgtgccgcaaattctt
gaactgatgctcaagcgccagggcatcgaccagtacgcactacgcgccagcctggaccac
caggtgcgcgaattctgcgttcaggccggcgaaaccgacctcgacttcatcgcccgcctg
gcggccgaagaaggctttgtctaccgcttcgagcacaatgaaaaacgccataagctgatc
atcaccgacagactgcagtcactcggtctgataagtcacggtgtcatcaaacacgaggac
gacgccgaaggcttctaccgtgagcgtgaaccgtcagccccagacaccgtgctgtaccat
tccaaccacggcggcgaccagcctcaaccgtgcctacggcgcttgcgctacagcgaacag
gtgcgtactgcacggcaggttcaacgcgactacaccttcacccacccggcctatcatcag
gaacacagggcctcgggcccgtatcttgagcaccagtccacggactatgagtgcttcgac
taccccggccgttacaaacgcgatgccgttggcaagccgttcaccgaaaaccgcatcacc
ggcttgcgccatgacgtgcgtattgcccaagtgcaaggcgacgatgtgcgcttgcaacca
ggcctgagcttcaccctgacaggccacccgcgcgaagacctgaatgtgcattggcgggtc
agcacggttcgccacgaaggcagccagttcaccagcctgcaggaagaagctgccggggcc
gaccagggcacacgttacgagcaaaaggcggtactggtgccaggcagagccgagtggcgc
ccagccccgttgcccaaaccacgcgttgacggcccgcacatggccaccgtggtggggccg
cccggtgaagagatctactgcgacgaatggggccgggtcaaggtcagcttcccctgggac
agagaaagccaggacaacgcgttcagttcctgctgggtacgcgtatcccaaggctgggcc
ggcggcagctggggctcgatggccatcccacggattggccaggacgtgatcatccactac
gtcaacggcgaccccgatcagccgatgatcaccggccgtacttactgcggtaaccagctg
ccaccgtacgaccttccccgtcacaagacccgcatgaccatcaagagccagacccacaag
ggcgatggcttcaacgagctgcgcttcgaggacgaactgggccaggaggaagtgttcatt
catgcccagagggaccagaacaatgtggtcaagcacgatgagactacgcaggtcggcaat
gaccgcaaagagcaggtcgatcacgacgaatcgatcctgatcggccacgaccgtacggaa
acggttggcaatgacgagcacatcaccatcgggcaggacgccgcgctcgacatcggcaga
aaccacacgatcaggatcgccaaggaccgtgtcgaaaacatcggcaatcaccgtcacgac
cagatcgccgccaatcaccacacccgtatcggtggcaacttcgagcaacgggtcgaaggg
catgccgagctggaagcccgtggggatatccgcagacgtactcgccgttatgaacttcga
gcatcggaagccgtggtcatccaaggccctgggggctccattcgaatcgacgaaacaggc
atcaccctggacagcccgacgattcgcatcaccggccagatgctcaagtcggcaaatggg
acgacaagccccttttccatcagcagtgccccgaacaccggcaagcctctggagcgcttg
tgtgggcgccgccctgatggttcctgccccctgcccgattgccgctgtatccgagggcca
gtccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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