KEGG   Paenibacillus polymyxa E681: PPE_00335
Entry
PPE_00335         CDS       T01319                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ppy  Paenibacillus polymyxa E681
Pathway
ppy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ppy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PPE_00335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppy03400]
    PPE_00335
Enzymes [BR:ppy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PPE_00335
DNA repair and recombination proteins [BR:ppy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PPE_00335
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase TMEM101
Other DBs
NCBI-ProteinID: ADM68217
UniProt: E0RC42
Position
complement(383103..384065)
AA seq 320 aa
MRTELKPVIPFEPELSEKVPVDPGLWRYEIKWDGTRIMTYHNQGSTRLFNRKQHERTLLY
PELALFPSYCKADSVILDGEMIALGADGKPSFHEIMRRDLIRRTDRIQSAYEAVPATYML
FDIVYLNGEWVHLKPLQERLELLHQIIIPNERIQLAPAHPDGQALFQVMCSQGMEGIVCK
KLDSPYTLGGKDERWVKVKNYGDIIAVIGGYTLNGGIINAVLLGQYDKQGMLRYIGHVGT
GKLTREDWRQLTERLLPHTISERPFSNKPDRHQDAFWVQPMYTAKVQYSEWRWQEGRTLR
QPSIQAFVNQGLDQCIGPWI
NT seq 963 nt   +upstreamnt  +downstreamnt
ttgcgtacggaattaaaacctgtcatcccgtttgaaccggaactgagcgaaaaagtacct
gtagatccgggcctttggcgttatgaaataaaatgggacggtacgagaattatgacgtat
cacaaccagggcagcacacgcctgtttaaccgcaagcagcatgaacgaacgcttttatac
ccggagcttgctctcttcccctcctactgtaaggcagattcggtcatattggacggggaa
atgatcgcactcggtgccgacggtaagccatcgttccatgaaattatgagacgggatctg
attcgtcggacggatcgaattcagtcagcctatgaagctgtacccgctacttacatgttg
tttgatattgtttatctgaacggggagtgggttcatcttaaaccgttacaggaaaggctc
gaactgctgcatcagatcatcataccgaatgaacggattcaactggcccccgctcatcct
gatggacaagctctatttcaggtcatgtgcagccaaggaatggaaggcattgtttgtaaa
aagctggatagtccgtacacattgggcggaaaagatgaacgatgggtcaaggtcaaaaat
tatggcgatatcattgccgttatcggtggctataccctaaacggaggcatcatcaacgct
gtgttgctgggccaatatgataaacaaggaatgctgcgctatatcgggcatgtgggtacg
ggtaagctgactcgggaagattggcgtcagcttaccgagcgcctgctgccacataccata
tcggagcgaccctttagcaataaaccggatcgacatcaagatgcattttgggtgcaaccc
atgtataccgccaaggtccaatatagtgagtggcgatggcaagaaggacgtactctgcgt
caaccctccatacaagcctttgtgaatcagggcctcgatcagtgtatcggtccctggata
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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