KEGG T01319: PPE

Paenibacillus polymyxa E681: PPE_00335

Entry

PPE_00335 CDS T01319

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ppy Paenibacillus polymyxa E681

Pathway

ppy03410	Base excision repair
ppy03420	Nucleotide excision repair
ppy03430	Mismatch repair
ppy03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ppy03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ppy03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ppy03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ppy03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme TMEM101

Other DBs

NCBI-GI:

308067150

NCBI-GeneID:

9773092

UniProt:

E0RC42

Position

complement(383103..384065)

AA seq 320 aa
MRTELKPVIPFEPELSEKVPVDPGLWRYEIKWDGTRIMTYHNQGSTRLFNRKQHERTLLY
PELALFPSYCKADSVILDGEMIALGADGKPSFHEIMRRDLIRRTDRIQSAYEAVPATYML
FDIVYLNGEWVHLKPLQERLELLHQIIIPNERIQLAPAHPDGQALFQVMCSQGMEGIVCK
KLDSPYTLGGKDERWVKVKNYGDIIAVIGGYTLNGGIINAVLLGQYDKQGMLRYIGHVGT
GKLTREDWRQLTERLLPHTISERPFSNKPDRHQDAFWVQPMYTAKVQYSEWRWQEGRTLR
QPSIQAFVNQGLDQCIGPWI

NT seq 963 nt +upstreamnt +downstreamnt
ttgcgtacggaattaaaacctgtcatcccgtttgaaccggaactgagcgaaaaagtacct
gtagatccgggcctttggcgttatgaaataaaatgggacggtacgagaattatgacgtat
cacaaccagggcagcacacgcctgtttaaccgcaagcagcatgaacgaacgcttttatac
ccggagcttgctctcttcccctcctactgtaaggcagattcggtcatattggacggggaa
atgatcgcactcggtgccgacggtaagccatcgttccatgaaattatgagacgggatctg
attcgtcggacggatcgaattcagtcagcctatgaagctgtacccgctacttacatgttg
tttgatattgtttatctgaacggggagtgggttcatcttaaaccgttacaggaaaggctc
gaactgctgcatcagatcatcataccgaatgaacggattcaactggcccccgctcatcct
gatggacaagctctatttcaggtcatgtgcagccaaggaatggaaggcattgtttgtaaa
aagctggatagtccgtacacattgggcggaaaagatgaacgatgggtcaaggtcaaaaat
tatggcgatatcattgccgttatcggtggctataccctaaacggaggcatcatcaacgct
gtgttgctgggccaatatgataaacaaggaatgctgcgctatatcgggcatgtgggtacg
ggtaagctgactcgggaagattggcgtcagcttaccgagcgcctgctgccacataccata
tcggagcgaccctttagcaataaaccggatcgacatcaagatgcattttgggtgcaaccc
atgtataccgccaaggtccaatatagtgagtggcgatggcaagaaggacgtactctgcgt
caaccctccatacaagcctttgtgaatcagggcctcgatcagtgtatcggtccctggata
tga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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