KEGG T02456: H045

Pseudomonas poae: H045_03370

Entry

H045_03370 CDS T02456

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ppz Pseudomonas poae

Pathway

ppz03410	Base excision repair
ppz03420	Nucleotide excision repair
ppz03430	Mismatch repair
ppz03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ppz03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ppz03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ppz03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ppz03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

447915678

NCBI-GeneID:

14502478

Position

complement(731871..733505)

AA seq 544 aa
MKAFAELYANLDATTSSNAKLAALQAYFLQAPPEDAAWAVYFLSGGRPRQLVPTRLLRDM
ATQASGIEAWLFEESYQSVGDLAETISLLLPESTYTSEDGLAVWLEEKLLPLRGLSPLDL
AERLPALWAQLDQPSLMVCIKLITGSFRVGVSKLLVTRALAAMADLDSKRVAQRLVGYTD
LSNRPTAEGYLKLIAPESTDEHAQRGGQPYPFFLAHGLSQPVEQFDTLLGAPTDWQVEWK
WDGIRAQLVKREGRLWIWSRGEELVTERFPELHSLVSGLPDGTVIDGEIVVWNGAVQPFA
LLQQRIGRKTLSKKVLEDAPVAVLAYDLLEYQGEDWRNHVQAERRAQLEQVITACDQPVL
LPSPLLQADTWEALAEQREASRSLGVEGMMLKDRNGLYGVGRTKDMGLWWKWKVDPFSVD
AVLIYAQRGHGRRASLYSDYTFAVWDGPPGTERTLVPFAKAYSGLTDEEMRKVDAIVRKT
TVEKFGPVSSVTPSMVFELGFEGIALSKRHKSGIAVRFPRMLRWRQDKAVDEADNLATLQ
DLLA

NT seq 1635 nt +upstreamnt +downstreamnt
atgaaggccttcgccgagctgtacgccaacctcgacgccaccacttccagcaacgccaag
ctggccgcattgcaagcctacttcctgcaggcgccgccagaggatgccgcctgggcggtg
tactttctgtccggcggccggccacgacaactggtgccgacgcgccttttaagggacatg
gccacgcaagcgtcaggcatcgaagcctggctgttcgaagagagctaccagtcggtcggt
gacctcgccgagaccatttccctgctcttgcccgaatccacctacacctcagaggatggc
ctggccgtttggctggaagaaaaactgttgcccctgcgcggcctgtcgcccctggatctg
gccgaacgcctgcccgcgctgtgggcgcagctggatcaacccagcctgatggtgtgcatc
aagctgatcaccggcagctttcgcgtcggcgtgtccaagctactggtcacccgtgccctc
gccgccatggccgatctggacagcaagcgcgtggcacagcggctggtgggctacacagat
ttgtccaatcgccctacggccgaaggctacctcaagctgattgcacctgaatcaaccgac
gaacacgcgcaacgtggcgggcagccctatccgttttttctggcccatggcctgtcgcag
ccggtcgagcagttcgacaccctgctcggcgcgccgactgactggcaagtggaatggaag
tgggacggtatccgcgcacaactggtcaagcgcgagggccgtttgtggatctggtcgcga
ggtgaagagctggtgaccgagcgcttccccgagctgcacagcctggtgagcggcctgccg
gacggcacggtgatcgacggcgagattgtggtgtggaacggcgcggtgcaaccctttgcc
ctgctgcaacagcgtattggccgcaaaacgttgagcaaaaaagtcctggaggacgcgccg
gtcgcggtacttgcctacgacctgctggaatatcagggcgaagactggcgcaaccatgtc
caggcagaacgccgcgcgcagctcgaacaggtcatcaccgcgtgcgaccagcccgtgctg
ctgccctcgccgttgttgcaggccgacacctgggaagcgctggccgagcagcgcgaagcc
tcgcgcagccttggcgtggaaggcatgatgctcaaggatcgcaacggcctttacggcgtt
ggccgcaccaaggatatgggcctgtggtggaagtggaaggtcgacccgttcagcgtcgat
gcggttttgatctacgcccaacgcggccatggccgccgtgccagtctgtacagcgactac
accttcgccgtgtgggacggcccgcccggcaccgagcgcacgctggtgccgtttgccaag
gcttattcgggattgaccgacgaagaaatgcgcaaggtcgacgccatcgtgcgcaagacc
accgtggaaaaattcggccctgtcagcagcgtgacgccgagcatggtgtttgagctgggg
tttgaagggatcgcgctatccaagcggcacaagagcgggattgccgtgagatttccacgc
atgctgcgctggcgccaggacaaggcggtggatgaagccgacaacctggctaccctgcag
gacctgctggcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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