KEGG   Pseudomonas poae: H045_12260
Entry
H045_12260        CDS       T02456                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ppz  Pseudomonas poae
Pathway
ppz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H045_12260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppz03400]
    H045_12260
DNA repair and recombination proteins [BR:ppz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H045_12260
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      H045_12260
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD HAMP AAA_22 AAA_30 Cauli_AT
Other DBs
NCBI-ProteinID: AGE26517
Position
complement(2826647..2828662)
AA seq 671 aa
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLASLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRANNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRDSGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEINKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLEHGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcggatttccagctcgtcacccgctttgaaccggccggcgaccagcccgaagccatt
cgccagatggtcgaaggcatcgaggccggcctggcgcaccagacgctgctcggggtgacc
ggttcgggcaagaccttcagcattgccaacgtgatcgcgcagatcaaccgcccgaccctg
gtgctggcgccgaacaagaccctggccgcgcagctgtacggcgagttcaaggcgttcttc
ccgaacaatgcggtggagtatttcgtctcctactacgactattaccagcccgaagcctac
gtgccgtcgtccgacaccttcatcgagaaagatgcgtcgatcaacgaccatatcgagcag
atgcgcttgtcggcgaccaaggcgttgcttgagcgcaaggacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagcccggaaacctatctgaagatggtgttgcacgtt
gaccgtggcgacaaactcgaccagcgcgaattgctgcgccgcctggcgagcctgcaatac
acccgcaacgacatggactttgcccgcgccaccttccgcgtgcgcggcgatgtgatcgac
atctacccggccgaatcggacctggaggctatccgcatcgagctgttcgacgatgaggtg
gaaagcctgtcggctttcgatccattgactggggaggtgatccgcaagctgccgcgcttc
accttctaccccaaaagccactatgtaacgccccgggaaaccctgatgggcgccattgaa
ggtatcaaggtcgagctggccgagcgcctggaatacctacgcgccaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgcttcgacctggagatgatcctggagctgggc
tactgcaacggcatcgaaaactactcgcgctatctgtcgggccgtgactccggcgcgccg
ccgccgacgctgtacgactacttgccgccggacgccttgctggtgatcgacgagtcccac
gtcagcgtgccgcaagtaggcgcgatgtataagggcgaccgctcgcgcaaggagaccctg
gtggaatacggtttccgcctgccgtcggcgctggacaaccggccgatgcggtttgacgag
tgggaggcgatcagcccgcagaccatttttgtgtcggccacgccgggcaattatgaggcc
gagcatgcgggccgggtgatcgagcaggtggtgcggccgaccggcctggtcgacccgcag
atcgaaatccgcccggcgctgacccaggtcgacgacctgctgtcggagatcaacaagcgc
gtggcgctggaggagcgggtgctggtgaccacgctgaccaagcgcatgtccgaagacctc
accgactacctggccgaccacggcgtgcgcgtgcgatacctgcactcggacatcgacacg
gtggagcgggtggagatcatccgtgatctgcgcctgggcacctttgatgtgctggtgggc
atcaacctgctgcgcgaaggtctggacatgccggaagtgtcgctggtggcgattctggat
gcggacaaggagggcttcctgcgctccgaacgttcactgatccagaccattggccgtgcg
gcgcgtaacctcaatggccgggcgatcctgtatgcggaccgcatcaccggttccatggag
cgcgcgatcggcgagaccgagcggcgccgtgaaaagcagattgccttcaacctcgaacat
ggcattacccccaagggtgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaggaaagcgccaag
tacgagaacgaattgcgctcgccgagtgagatcaccaagcggattcgccagttggaagag
aagatgtaccagttggcacgcgatcttgaattcgaggcggcggcgcagacgcgtgatgag
attggcaaattgcgcgagcggttgctggctgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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