KEGG   Pandoraea sp. RB-44: X636_13230Help
Entry
X636_13230        CDS       T02950                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
prb  Pandoraea sp. RB-44
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:prb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    X636_13230
Enzymes [BR:prb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     X636_13230
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     X636_13230
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2858261..2859091
Genome map
AA seq 276 aa AA seqDB search
MPELPEVEVTRRGIAPHVAGTRVARIDVRNASLRWPVPDGLDARLRGETLIGVTRRGKYL
LLEYAPGWLLVHLGMTGTLRVMPEPHALPAAGVHDHIDLVFEHCALRYRDPRRFGAVLFH
PRTSGDVLLHPLLASLGVEPLTDAFDGAWLHAGTRGRTVSIKQALLAGSIVVGVGNIYAS
ESLFRARIHPRMPAGKLTRPRAGKLAAAVKEVLAAAIEKGGSTLRDFVGSDGKSGYFQQE
YFVYDRAGLPCRVCGTPIRQIVQGQRSTFFCPHCQK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactcccagaagtcgaagtcacccgccgcggtatcgcgccgcatgtggcgggc
acgcgtgtcgcacgcatcgacgtgcgcaacgcctcgctgcgctggccggtacccgacggg
ctggacgcacgcctgcgcggcgagacgctcattggcgtgacccgtcgcggcaagtacctg
ctgcttgaatatgcacccggatggctgctcgtgcatttgggcatgaccgggacgttgcgt
gtcatgcccgagccgcacgcattgccagcggccggcgtgcacgaccacatcgatctggtc
ttcgagcactgtgcactgcgttatcgcgacccccggcgcttcggcgccgtgctgtttcat
ccgcgcacctcgggcgatgtgcttctgcacccgctgctcgccagtctgggagtcgagccg
cttaccgacgctttcgatggcgcctggctgcatgccggcacgcgggggcgaacggtctcc
atcaagcaggcgctgctcgcgggtagcatcgtggtgggtgtgggcaacatctacgcttcg
gagagcctgtttcgcgcgcgcattcatccgcgcatgccggcgggcaagctcacgcgcccg
cgcgccgggaaactcgccgcggccgtcaaggaagtgctcgccgccgccatcgagaagggc
ggcagtaccttgcgggacttcgtcggcagcgacggcaaaagcggctatttccagcaggaa
tatttcgtctacgatcgcgccggcctgccgtgccgggtgtgcggcacgccgatccggcag
atcgtgcaggggcagcgctccacgttcttctgcccccattgccagaaatag

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