KEGG   Prochlorococcus sp. MIT 0604: EW14_1840
Entry
EW14_1840         CDS       T03304                                 
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
prc  Prochlorococcus sp. MIT 0604
Pathway
prc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EW14_1840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prc03019]
    EW14_1840
   03009 Ribosome biogenesis [BR:prc03009]
    EW14_1840
Enzymes [BR:prc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     EW14_1840
Messenger RNA biogenesis [BR:prc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EW14_1840
Ribosome biogenesis [BR:prc03009]
 Prokaryotic type
  rRNA processing factors
   EW14_1840
SSDB
Motif
Pfam: RNase_E_G
Other DBs
NCBI-ProteinID: AIQ95849
UniProt: A0A089QML7
Position
1541333..1543138
AA seq 601 aa
MSQQIIIAEQARIAALLTDDRVDELIVAQGQYQIGDIFLGTVENVLPGIDAAFINIGESE
KNGFIHVSDLGPLRLKKGTFGITELLEPKQKVLVQVIKEPTGSKGPRLTGNISIPGKYLI
LQPNAQGVNISRKINTETERNRLKALGVLIKPPSTGLLFRTEAEKIKEELLIEDLEHLIQ
QWENVLKVSEASNPPNLVKRDDDFSIKILRDHIKESTKSIIIDSKFSVARAKDFLINYES
DIDIKFHDNSLNQHIFDKYEIKKTIQKALLPRVDLPSGGYIIIEPTEALTVVDVNSGSFT
RSANSRQTVLWTNCEAAVEISRQLKLRNIGGVIVVDFIDMESRRDQFQLLEHFTSAIKDD
SAKPQIAQLTELGLVELTRKRQGQNIYELFGKKCSTCDGTGHVENILNHEISNLKIKNIE
HKSNNLKSLDTDTSQSNDEEEKIIDRDLLNSKDLNKENSSYKNENDNLNQSNSKEKKIIT
VDLTNEEKIVFSQLGINPLIKLGKEYLTSNNFVRLNDNNKESGKTLDNKKTKTKQIKKIS
KSGEEKIQIKNEANANSKDKSTHKTNESNEVVFTDKKDEIELTDELNNARKKRRRSSASI
E
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtctcagcaaattatcatcgctgagcaggctcgaattgcagcactactcacagatgat
cgagttgatgaattaatcgtcgcacaaggtcaatatcaaattggcgatatttttttagga
acagtggaaaatgttctccctggtattgatgccgctttcataaatattggtgaaagtgag
aaaaatggattcatccatgtttcagatttaggtccattaagactcaaaaaagggacattt
ggaataactgaattactagaaccaaaacaaaaagttcttgtacaggtaataaaagaaccc
actggatctaaaggaccaagactaactggcaatatttcaatcccaggaaaatacttgata
cttcagccaaatgcccaaggagtaaatatttcaagaaaaataaatacagaaacagaacga
aaccgtttgaaagctcttggggttttaataaaaccccctagtacaggcttattatttaga
acagaggctgaaaagataaaagaagaacttctaattgaagatttagaacatttaattcaa
caatgggaaaatgttctaaaagtttctgaggcttctaatcctccaaatttagtaaaaaga
gatgacgatttctctattaagatcttaagagatcatattaaagaatcaactaaaagcata
attatcgatagtaaattttcagttgcaagggcaaaagattttttaattaattatgaatct
gatatagatattaaatttcacgataacagtttaaaccaacatatttttgataaatacgaa
attaagaaaacaattcaaaaagccctcctcccaagagtagatttaccttcggggggttat
ataattattgaacctacagaagctttaacagttgtagatgtaaactctggatcattcaca
agatccgccaactcaagacaaaccgttttatggactaactgcgaagcagcagttgaaatc
tcaagacaactgaagttaagaaatattggtggagttatagtagtagattttattgatatg
gaatctagaagagatcaatttcagttacttgaacattttacttcagcaataaaagatgat
tctgctaagcctcaaatagctcagcttactgaattaggattagtggagttaaccagaaaa
agacaaggtcaaaatatatatgaattattcgggaaaaaatgttctacatgcgatggaaca
gggcatgtagaaaatatattaaatcacgaaatttctaacttaaaaattaagaatattgaa
cataaatcaaataatcttaaatctctagatacagatacttctcaatcaaatgatgaggag
gaaaaaataattgacagggatttacttaactccaaagacttaaataaagagaactcttct
tataaaaatgaaaatgataatttaaaccaatcaaattcaaaagaaaaaaaaataataaca
gttgatcttactaatgaagaaaaaattgttttcagtcaattaggtataaatccacttata
aagttaggtaaagaatatctcactagcaataattttgtacgtttaaatgacaataataag
gaatcgggaaaaaccttagataataaaaaaacaaaaacaaaacaaattaaaaaaatctca
aaatcgggagaagaaaagattcaaattaaaaatgaagcaaatgcaaattctaaagacaaa
tcaacacataaaactaatgagagtaatgaagttgtatttacagataaaaaagatgaaatt
gaacttacagatgagctaaacaatgcaagaaaaaaaagaagaagatcttcagcaagcatt
gaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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