KEGG T02708: PCA10

Pseudomonas resinovorans: PCA10_00180

Entry

PCA10_00180       CDS       T02708

Symbol

rsmB

Name

(GenBank) ribosomal RNA small subunit methyltransferase B

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

pre Pseudomonas resinovorans

Brite

KEGG Orthology (KO) [BR:pre00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pre03009]
    PCA10_00180 (rsmB)
Enzymes [BR:pre01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     PCA10_00180 (rsmB)
Ribosome biogenesis [BR:pre03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    PCA10_00180 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB Methyltransf_25 FtsJ Methyltransf_31 PCMT MTS Methyltransf_15 Methyltr_RsmF_N Methyltransf_23 Methyltransf_11 CMAS Cons_hypoth95 Ubie_methyltran

Other DBs

NCBI-ProteinID:

BAN45750

UniProt:

S6AE71

Position

complement(18925..20238)

AA seq 437 aa
MNPRLAAARALAAVLSGKASLGGSLPPQLDKVDPRDRALAQDLAFGAARWQPRLAMLAER
LLQKPFKAADRDVEALLLVGLYQLFYTRIPAHAAIGETVGCSEKLKKPWAKGLLNAVLRN
AQRQGEAIFAELERDPAARTAHPRWLQKALKAAWPEHWEAVCAANNAHPPLILRVNRRHG
SRDAYLAELEQAGIKAEPCSYSRDGIRLAEACDVKTLPGFAEGRVSVQDEAAQLAADLLE
LAPGQRVLDACCAPGGKTCHLLEAEPGLAEVVAVDLEESRLVRVRENLQRLGLEARLIAA
DGRDTARWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRKQEDIPALAQLQGELLDALWQ
TLEVGGVLLYATCSTLPMENSDNIAAFLARTPGARELDIPGPYGLKQPHGRQLLAQEDGH
DGFYYAKLIKIAASARG

NT seq 1314 nt +upstreamnt +downstreamnt
atgaacccacgcctcgccgccgcgcgcgccctggccgccgtactgtccggcaaggcctcc
ctgggtggcagcctgccgccccagctggacaaggtcgatccccgcgaccgcgccctggcc
caggacctggcctttggcgcggcacgttggcaaccacgcctggcgatgctcgccgagcgc
ctgctgcaaaagcccttcaaggccgccgacagggatgtggaagccctgttgctggtgggg
ctctaccagctgttctacacccgcattcccgcccatgccgccatcggcgaaaccgtcggc
tgctcggaaaaactgaagaagccctgggccaagggcctgctcaacgccgtgttgcgcaac
gcccagcgccagggcgaagccatcttcgccgaactggaacgcgacccggcggcgcgcacc
gctcacccgcgctggctgcagaaggccctcaaggccgcctggccggagcattgggaagcg
gtctgcgccgccaacaacgcccacccgccgctgatcctgcgggtcaaccgccgccacggc
agccgcgacgcctacctcgccgagctggagcaggccgggatcaaggccgagccctgcagc
tacagccgcgatggcatccgcctcgccgaagcctgcgacgtgaagaccctgcccggcttc
gccgaaggccgcgtcagcgtgcaggacgaagccgcgcaactggccgccgacctgctcgaa
ctggcgcccggccaacgggtgctggacgcctgctgcgcccccggcggcaagacctgccac
ctgctggaagccgagcccggcctggccgaagtggttgcggtcgacctcgaggaaagccgc
ctggtgcgggtccgcgagaacctccagcgactgggcctggaagcacgcctgatcgccgcc
gatggccgcgacaccgcccgctggtgggacggcaagcccttccagcgcatcctgctggac
gcgccctgttcagccaccggcgtgatccgccgtcatccggacatcaaactgacccgcaaa
caggaagacatccccgccctggcgcagctccagggcgagttgctggacgccctctggcag
accctggaagtgggcggcgtgctgctgtacgccacctgctccacactgcccatggaaaac
agcgacaacatcgccgccttcctcgcccgcaccccgggtgcccgcgagctggacatcccg
ggcccctacggcctgaagcaaccccatggccgccagttgctggcgcaggaagacggccat
gatggtttctactatgccaagctgatcaagatcgccgcctcagcgcgcggctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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