KEGG   Pseudomonas resinovorans: PCA10_12170
Entry
PCA10_12170       CDS       T02708                                 
Name
(GenBank) hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
pre  Pseudomonas resinovorans
Brite
KEGG Orthology (KO) [BR:pre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pre03400]
    PCA10_12170
DNA repair and recombination proteins [BR:pre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     PCA10_12170
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 FtsK_SpoIIIE ResIII AAA_10 AAA_30 SLFN-g3_helicase TrwB_AAD_bind Zot T2SSE AAA_19 AAA_7 SRP54 CbiA AAA_6 Hydrolase nSTAND3
Other DBs
NCBI-ProteinID: BAN46949
UniProt: S6BD50
Position
1303710..1305209
AA seq 499 aa
MPEQLSLILGADPEGNAVSQAMKLANRHGLIAGATGTGKTVTLQRLAEVFSDAGVAVFAA
DIKGDLCGLGAIGNPQGKVAERIASMPWLGHRPQAYPVTLWDVAGQSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFQVADREGLLLLDLKDLKALLNHLKDHPELLGEDRALFAG
ASAQALLRRLATLEQQGAEALFGEPALQLEDILQPDRDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFSGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPSDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAIDTLAVLTEL
GIGEALVGTLEEKGTPAMVQRVAIAPPQSRIGPLTEAERTALVRGSPQAGHYDKAIDRES
AYEMLTARKAEAPAEADAPAKAGGKAPAEQPGVGDLAGELLGSFASQAMKTAVRQAANQL
GRQLVRGLMGSLLGGSKRR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgcccgaacaactttccctgattcttggtgccgatccagagggcaatgccgtttcccag
gccatgaagctggccaaccgccatggcctgatcgccggcgccaccggcaccggcaagacg
gtgactttgcagcgcctggccgaggtgttcagcgatgcaggtgtggcggtcttcgctgcc
gatatcaagggcgatctctgtggcctgggcgccatcggcaacccccagggcaaggtggcc
gaacgcatcgcctcgatgccctggctggggcatcggccgcaggcgtatccggtgaccctc
tgggacgtggccgggcagtccggccatccgctgcgcacgaccctcagcgaaatgggcccc
ctgttgctgggcaatctcctggaactgaccgacagccagcaggccgcgctctacgccgcc
ttccaggtggccgaccgcgaaggcctgctgttgctcgatctgaaggacctcaaggcactg
ctcaaccacttgaaggaccaccccgaattgctgggggaggatcgcgccttgttcgccggt
gcttccgcccaggcactgctacgtcgcctggcgaccctggagcagcagggcgccgaagcg
ctgttcggcgaaccggccctgcaactggaagacatactccagcccgatcgcgacggtcgc
ggacgcatccatctgctggacgccagccgcctggtccacgaagcgcccaaggtttacgcc
accttcctgctctggttgctggccgagttgttcgagcagttgcccgagcgcggcgatgcc
gacaaaccggtgctggcgctgttcttcgacgaggcccacctgctgttcagcggcaccccg
aaagccctgcaggaacgcctggagcaggtggtgcggctgatccgctccaagggcgtcggt
gtctacttcgtcacccagtcccccagcgacctgccggacgacgttctggcccagctgggc
ctgcgcatccagcacggcctgcgcgcgttcaccgccaaggagcagaaatccctgcgcgcg
gtggctgacggattccgtccgaacccggcgatcgacaccctggcggtgctcaccgagctg
ggcattggcgaagccctggtgggcaccctggaagagaagggcaccccggccatggtccag
cgcgtggcgatcgcgccgccgcagtcgcgtatcggtccgctgaccgaggccgagcgtacg
gccctggtgcgtggttcgccccaggccgggcactacgacaaggccatcgaccgcgagtcc
gcctatgaaatgctcacggcccgcaaggccgaggcccccgccgaagcggacgctcccgcc
aaggccggcggcaaggcgccggccgaacagcccggtgtgggcgatctggccggcgagctg
ctgggctccttcgccagccaggcgatgaagacggcggtgcgccaggccgccaaccagctg
ggtcgccagttggtgcgcgggctgatgggctccttgctgggaggcagcaagcggcgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system