KEGG   Poecilia reticulata (guppy): 103459505
Entry
103459505         CDS       T05149                                 
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
  KO
K08881  tripartite motif-containing protein 24 [EC:2.3.2.27]
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pret01001]
    103459505
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pret04121]
    103459505
Enzymes [BR:pret01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103459505
Protein kinases [BR:pret01001]
 Serine/threonine kinases: Other
  TIF1 family [OT]
   103459505
Ubiquitin system [BR:pret04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103459505
SSDB
Motif
Pfam: Bromodomain zf-B_box PHD zf-RING_UBOX zf-RING_5 zf-C3HC4_2 zf-C3HC4 zf-RING_2 DUF3583 FemAB_like PRANC ANIS5_cation-bd
Other DBs
NCBI-GeneID: 103459505
NCBI-ProteinID: XP_008399337
UniProt: A0A3P9NUV4
Position
LG23:9584953..9598293
AA seq 1042 aa
MDESADNDDLVIIVENEAESLPAGEEKVKQLGAFGLMDTCPICKLSFHNREPKLLPCLHS
FCRRCLPPPLRSAEPRRDPHGPVGSIRCPVCGQECWEVDVLDNFFVKDSAEVPSSTVEKT
SQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSPEALGVSTQK
PVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLETMTLQLQE
KRKAIEEVSSCINSGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILINQLEALTKDHD
LALKKQQDDINALTRQLDHVISFTKWATASHSGTALLYCKRLILYQIHYLMRTSYNPSIV
PQSSVRFQCRSGFWASNVDLGSLVVERCPGRPPIPNHQQGPRPEAPTGGLSLAAAQQRQS
TLAQLQMQVDKLSHHPQRQPPPNHWSWYQNVRLSAPPGPPPPTRPIHGGSSPSQAPPGLV
QPGRRFGNSHPNPRSPPASMIQSPGYGASQSLRELIHSNTFPPKPIDISQGAPRFPQPLS
APQVALHQRCMPESSLLKRSEAGLPVPTVSISIPKPTMGLGLAAGSSEKSSSSFGHVTGH
GGQNSPLAKPSSSDRTAGSMSWRSAPPSAPAPKRRRRMSPGPVIVIKDEPEDEDEVRFVQ
SSGGSSLPDSSTGAQSKPRPPPKGLVASTALASTSVDQCNQTQLQPDPEKKPEPEDDPNE
DWCAVCQNGGELLCCDKCPKVFHLSCHIPALNESPSGEWFCSFCRDTESPEMEYDCDRGS
GPGSEHFPSVDKRKCERLLLRLFSNDFSTDFQHPASPSETRRYKELIKTPMDLTMVKKKL
QSKEDECYGNPEEFVSDVRLIFFNCAKYYKATSEIGSAGLYLEDYFEEQLKLAYPDKVFP
GGREEQMIPPLEDEIEEEEEQPMEQSAAAAEDKKPQSPAGDGDGGMVPKEEPMAPAESEN
LEESSEMTQKETEEATADVEGGVPPAEEAKPDESVDGKQAESCPASDTEAKDGGEDEKAQ
LPTDDAEDTPDTSENPASEQQG
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggatgaaagtgctgataacgacgacctcgtcatcatcgtggagaacgaggctgaaagt
ttgcccgcaggggaagagaaggtgaaacagttgggagccttcgggctcatggacacatgt
cccatctgcaagctaagtttccacaacagggagcccaaactgctgccgtgtttgcactcc
ttctgccggaggtgcctgcctcccccgttgaggagcgccgagccgaggcgggacccgcac
ggtccagttggttccattcggtgtccggtgtgcggacaggaatgctgggaggtcgacgtg
ttggacaacttctttgtcaaggactctgccgaggtgcccagcagcacagtggagaaaacc
agccaggtgtgcatgagctgtgacgacaacaccgaggcgacgggctactgcgtggagtgc
gtggagttcctgtgcttgacatgcatcgaggcgcaccagagggtgaagttcacccgagac
cacaccatacgccagaaggaggagatgtctccagaggctctgggcgtttccacgcagaag
cccgtcttctgcgacgtccacaagcaggagccgctgaagctgttctgcgagacgtgcgac
cggctcacgtgtcgagactgccagctcctcaaacacaaggaccacaactaccagttcttg
gaggatgcgtacaggaaccataagcagtatctggaaaccatgacgctgcagttgcaagaa
aagagaaaagccattgaagaagtgtcgagctgtatcaactccggactgcagcaagtggag
gaaaaccggaaagctgtgacgaacgaaataaagaagtccatctgtaacctgatcatggag
atcaacaggaagggaaagatcctgataaaccagctcgaggcgctgactaaggaccacgat
ttggctctgaagaagcagcaggacgacatcaacgccctgacgaggcagctggatcacgtg
atcagcttcaccaagtgggcgacggcgagtcacagcggaacggctctgctgtactgcaag
agactgatcctctaccagatccactacctgatgagaacgagctacaacccgtccatcgtc
ccgcagagctcggttcgcttccagtgccggtcgggcttctgggcctcaaacgtagacctc
ggttcgctggtggtcgagcgatgtccagggaggccacccatccccaaccatcagcagggt
cccagacccgaggccccgaccgggggtctttccctcgcagcagcacagcagcgacagagc
actctagctcagctccaaatgcaggttgacaagctctcccaccatcctcagaggcagccc
cctcctaaccactggtcctggtatcaaaatgtcaggctctcagctcctccaggccccccc
ccacctaccagacccatccatggggggtcttcaccctcccaagctcctcccggcttggtg
cagcctggacgcaggttcgggaacagccatccaaaccccaggagccctccggcgtccatg
attcagagcccaggctacggagcgtcacagtctctacgagaactaatccacagcaacacg
ttcccccctaaacccatcgacatatcgcagggcgctccccgcttcccgcagcctctgtct
gctccccaggtcgctctgcaccagagatgcatgccggagtcgtccctcctaaagaggagc
gaagcaggtctgcccgtccccaccgtcagcatctccatccccaaacctaccatgggtttg
ggtctggcagctggaagctcagaaaaaagcagcagctcgtttggtcatgtgacaggtcac
ggagggcagaactcgccgctggcgaagccgtcctcttctgacagaacagctgggtcgatg
tcctggaggtcagcgcctccatcggcccccgcgccgaagcggaggaggagaatgtctccg
gggcccgtaatcgtcatcaaggacgaacccgaggacgaggacgaagttcgttttgtgcaa
tccagcggcgggtcgagcctcccggacagcagcaccggcgctcagtcgaagccccggccg
ccgccaaagggactggtggcgtccacggccctggcgtccacctccgtcgaccagtgcaat
cagacccagttgcagcccgacccagaaaagaagccggagccagaggacgaccccaacgag
gactggtgcgccgtgtgtcagaacggcggggagctgctctgctgcgacaagtgccccaaa
gttttccacctctcctgccacattccggctctgaacgagtcgccgagcggtgagtggttt
tgctcgttctgccgggacacagagtcaccagagatggagtacgactgcgacagaggcagc
gggccgggctctgaacacttcccctctgtggacaaaaggaaatgcgagcggctgctgcta
cgcttgttcagtaatgacttcagcacagacttccagcaccctgcgtctccatcggaaact
cggcggtacaaggagctaataaagacaccgatggatttgacgatggtgaagaaaaaactg
cagtcgaaggaggacgagtgctacggaaacccggaggagtttgtttctgacgtcaggctc
atatttttcaactgtgccaagtactacaaggcgacatctgagattgggagtgccgggttg
tacctggaggattacttcgaggagcagctgaagctcgcctacccggacaaggtcttcccc
ggggggagagaggagcagatgatccctcctttagaggacgagatcgaagaagaggaggag
cagccgatggagcaaagcgccgccgcagcggaggacaagaaaccacaaagccctgcagga
gacggagacggcggaatggttcctaaggaagagccgatggctcctgcagagagtgagaac
ctggaggaaagcagcgaaatgactcaaaaagagacggaggaagcgactgcagacgtagag
ggaggcgttcctcctgcagaagaggcgaagccagatgagagcgtcgacggtaagcaggcg
gaaagctgcccagcttctgacacggaagctaaagatggcggcgaggacgagaaggctcag
ctgcctacggatgacgctgaggacacaccggacacttcggagaatccagcctcggagcaa
cagggatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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