KEGG   Poecilia reticulata (guppy): 103473196
Entry
103473196         CDS       T05149                                 
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13]
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pret03009]
    103473196 (ddx56)
Ribosome biogenesis [BR:pret03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103473196 (ddx56)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD
Other DBs
NCBI-GeneID: 103473196
NCBI-ProteinID: XP_008421445
UniProt: A0A3P9PKY7
Position
LG12:complement(2540790..2550155)
AA seq 558 aa
MAAERLRFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALDGKDLLARARTGSGKTAAY
AIPIIQRILASKQSVREQDVRALILVPTKELGQQVQTMMRQLTSSCSRDVRVADISGKAD
VSTQRPILMEKPDVVVGTPSRVLAHLNAQNLALHSSLEMLVVDEADLVFSFGFESDLKNL
LCHLPKIYQSFLMSATFNEDVQALKELLLHNPVTLKLQGSQLPDSSQLQQYTIKCEEEDK
FLLIYTLLKLQLVQGKTLLFVAAVDRSYRLKLFLEQFAIPACVLNSELPVQSRCHIISQF
NQGFYDIIIATDEQSLVEPAASSSGKKTKKNSKAKAAQAKDKEYGVSRGVDFQNVSNVIN
FDFPTSVDSYIHRVGRTARADNPGTALSFISHTELDALAEVEEALGGDKAEAALKPYEFK
MEEIEGFRYRCRDAMRAVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKD
LHPAVIKPHMKNIPDYLIPETLRGVVNPLSSRRRKRRIKPAPAGVVKSSFKKNVRGRNPL
KSFQYKRTGNKKARGGKS
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggctgctgaaaggctgcggtttcatgaaatgggattagacgaccgtctgttaaaggcg
gtggcggatctaggttggtctcagcccaccctgatccaagagaaggccattcctctggct
ctggatgggaaggaccttctggctcgagcgcggaccggatctggaaagactgcagcctac
gctatacccatcattcagcgcatcctggcctccaaacagagcgttcgtgagcaggacgtg
agagctctcatcctggtgccgaccaaagagctcggtcagcaggttcagaccatgatgaga
cagttgacgtcttcctgttctagagatgtccgggtggcagacatctccggcaaggccgac
gtgtcaactcagagacccattttaatggagaagcccgatgtggtggtggggacaccgtcc
cgcgttctcgcccacctcaacgcccagaacctggcgctccactcttccctggagatgctg
gttgtagacgaggccgacttggtcttctccttcggcttcgagtctgacctgaagaacctg
ctgtgccatttgccgaagatctatcagtcgtttctcatgtcggctactttcaacgaggat
gttcaggccttaaaggagctgctgctgcacaacccggtgaccttgaagctccagggctct
cagctgcctgacagcagccagctgcagcagtacaccatcaaatgtgaggaggaggacaag
ttcctgctcatctacacgctgctgaagctgcagctggtccaggggaaaacgctgctgttt
gtggcagcagtggaccgaagctacagactcaaactgtttctggaacagttcgccatccca
gcgtgcgtcttgaactcggagctgcccgtccagtccaggtgccacatcatcagccagttt
aaccaggggttctatgacatcatcatcgccacagatgagcagagcttggttgaacctgcc
gcgtcgtcttcagggaagaagacgaagaaaaatagcaaagcaaaagcagcacaggctaaa
gataaggaatacggtgtctccaggggcgtggatttccaaaacgtttccaatgtcatcaac
tttgatttcccaacgtctgttgattcgtacatccatcgagtcggaagaacagcgagagcc
gacaacccaggcaccgccctgtcgttcatctctcacaccgaactcgatgccttggcagag
gtggaggaggccctcggtggagataaagccgaggcggcgctcaaaccttacgagtttaag
atggaggagatcgaaggcttccggtacaggtgcagggacgccatgcgggccgtgacgaag
caggccgtgaaggaggccagactgaaggagatcaaacaggagctgctcaactcggagaag
ctcaagacatactttgaagacaaccccagagatctgcagctgctcagacacgacaaagac
cttcatcctgccgtcatcaagcctcacatgaaaaacattcccgactatctgattcctgag
actctgcgtggcgtagtgaatccactgtcaagcaggaggaggaagaggaggataaaacca
gccccagcaggagttgtgaaaagcagcttcaagaagaacgtccgggggaggaatccgctg
aagagtttccagtacaaacgaacaggaaacaaaaaagccagaggaggcaaatcatag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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