KEGG   Paenibacillus riograndensis: PRIO_6107
Entry
PRIO_6107         CDS       T03849                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pri  Paenibacillus riograndensis
Pathway
pri03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PRIO_6107 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pri03021]
    PRIO_6107 (rpoA)
   03400 DNA repair and recombination proteins [BR:pri03400]
    PRIO_6107 (rpoA)
Enzymes [BR:pri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PRIO_6107 (rpoA)
Transcription machinery [BR:pri03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PRIO_6107 (rpoA)
DNA repair and recombination proteins [BR:pri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PRIO_6107 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L PASTA HHH_5 OPA3
Other DBs
NCBI-ProteinID: CQR58458
UniProt: A0A0E3WJA7
Position
I:complement(7124009..7124953)
AA seq 314 aa
MIEIEKPKIETVEANDEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGIVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKREDQPIGVIPVDSIYTPISRVNYGI
DNTRVGQVTNYDKLTMEIWTDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq 945 nt   +upstreamnt  +downstreamnt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagccaatgatgaaggaacctat
gggaaattcgtagttgaaccgctggaacgtggatatggcacgactctggggaactcgctt
cgccggatcctgctttcctccctgccgggagccgcagtgacttcggtccaaattgacggc
gttctgcatgagttctcgaccgttcctggcgtaatggaagatgtgacggagatcattctg
aaccttaaagctctttccctgaagattcattcagatgaagagaaagtgttcgagattgat
gctgaaggtgaaggcatcgttaccgcaggtgatatccgtgcggacagcgatgttgagatc
ctgaacccggatcttcatattgcaacgctgggacctggcgcgagacttcacatgcgaatt
tttgcaggccgtggccgcggttacgtccaagcggaccgtaacaaacgcgaagatcagccc
atcggcgttattccggtggattccatctatacgcctatctcccgtgtgaattacggcatc
gacaacactcgtgtcggtcaagtgaccaactacgacaagctgacgatggaaatttggacg
gatggcagtattagaccggaagaggctgtaagcctgggagccaaaattttgaacgagcac
ctcgttttgttcgtaggtcttacggatgaagcgaaagacgccgaaattatggtggaaaaa
gaagaagacaaaaaagaaaaagtgcttgagatgacaatcgaagagctggatctttctgtt
cgttcttacaactgcctcaaacgtgccggtattaataccgtacaggagctgactacgaaa
acggaagaagatatgatgaaggtccgcaacctgggccgcaaatctttggaagaagttcaa
gagaagcttgaggaactgggactgggactccgtacagaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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