KEGG   Polaribacter reichenbachii: BW723_13450
Entry
BW723_13450       CDS       T04692                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
prn  Polaribacter reichenbachii
Pathway
prn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BW723_13450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prn03019]
    BW723_13450
   03009 Ribosome biogenesis [BR:prn03009]
    BW723_13450
Enzymes [BR:prn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BW723_13450
Messenger RNA biogenesis [BR:prn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BW723_13450
Ribosome biogenesis [BR:prn03009]
 Prokaryotic type
  rRNA helicases
   BW723_13450
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 RecG_N AAA_19 Helicase_RecD
Other DBs
NCBI-ProteinID: APZ47226
UniProt: A0A1B8U1C3
Position
complement(3160321..3162132)
AA seq 603 aa
MSTFLELGLKEPISKALIDLGYEKPTVIQEKAIPQIIASTDDLKAFAQTGTGKTAAFSLP
ILELLDENNSNVQAIILSPTRELAVQIGNNIKDFSKYQKNVKVTTVYGGSSMEEQIRSLK
KGSQIVVGTPGRTVDLINRRALKLGNVQWLVLDEADEMLNMGFKEELDKVLEATPETKQT
LLFSATFPREVEAIARNYMTKPVEVTSGEKNSGSENVEHEYYAVTERTRYPALKRIADLN
PDIYAIIFCRTRRETQEVADNLIKDGYNADSLHGDLSQAQRDSVMGKFRKKTIQILVATD
VAARGLDVTELTHVINHKLPDQIENYTHRSGRTGRAGNKGISIVLVNGKEKGKLRVIERI
IKKKFVEGKVPTGKEIVQNQLMNLIDKVQKTEVNESEINEFLPSIYDKLADLDREELIQK
FVSLEFNSMLAYYENAKDLNDLGRETSRKRSTADNMTRFFINIGRKDSLNPAKLIGLIND
QEIGDKIEIGAIDILDTFSFFEIDKNFEDKTLEAFSSNQPDFDGRSVNVEITKKERSGGG
RRGGKKPFGKKDGGFGRRRSSENSSRGSSDDGGRKRTDRRSSDRPKNSGDRKSGGFGRRR
RER
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtcaacatttttagaattaggcttaaaagagcctataagtaaagcattaatagattta
ggttacgaaaaacctactgttattcaagaaaaagcaatacctcaaataattgcatctaca
gacgatttaaaggcttttgcacaaactggtacaggtaaaactgctgcctttagtttacca
attttagaacttttagatgaaaacaatagcaatgttcaagctattattttatcaccaacg
agagaattagcagtgcaaattggtaacaacattaaagatttttctaaataccagaaaaac
gttaaagtaactactgtttatggtggttctagtatggaagagcagattcgttctttaaaa
aaaggatctcaaattgtagttggtactccaggtagaactgtagatttaattaacagaaga
gctttaaaattaggaaacgttcagtggcttgttttagatgaagctgatgaaatgttaaat
atgggttttaaagaagaattagataaagttctagaagcaaccccagaaacaaaacaaacc
ttattattttctgcaacatttcctagagaagtagaagcaattgcaagaaactatatgaca
aaaccagttgaagttacttctggtgaaaaaaattctggttcagagaatgtagagcacgaa
tactatgcagttacagaaagaactcgttacccagctttaaaaagaatagcagatttaaat
ccagatatttatgcaattatcttttgtagaactcgtagagaaacacaagaagttgcagac
aatttaataaaagacggttataacgcagattctttacatggagatctatctcaagcacag
agagattctgtaatggggaaattccgtaaaaaaacaattcagattttagtagctacagat
gttgctgcccgtggtttagatgtaaccgaattaacgcacgtaatcaatcataaattacca
gatcaaatagaaaactacacacacagaagtggtagaactggtagagctggtaataaaggt
atatcaatagtattagttaacggaaaagaaaaagggaaactacgtgttattgaaagaatc
attaaaaagaaatttgtagaaggtaaagtacctacaggtaaagaaattgtacaaaatcaa
ttaatgaatttaattgataaggttcaaaaaactgaagttaacgaatctgaaatcaatgaa
tttttacctagtatttatgataaattagctgatttagatagagaagaattaatccaaaaa
ttcgtttctttagaatttaactcaatgttagcgtattacgaaaacgctaaagatttaaat
gatttaggtagagaaacttcaagaaaaagatctactgcagataatatgactcgctttttt
atcaatattggtagaaaagacagcttaaaccctgcaaaattaatcggtttaatcaatgac
caagaaattggtgataaaattgaaattggtgcaatagatattttagataccttctctttc
tttgagattgataaaaacttcgaagacaaaacattagaagcattttctagtaatcaacca
gattttgatggacgctctgttaacgtagaaattacgaaaaaagaacgttcaggtggagga
agaagaggtggtaaaaaaccttttggtaaaaaagatggtggttttggaagaagaagaagt
tctgaaaattcatctagaggaagtagtgatgatggaggaagaaaaagaactgacaggcgt
tcttctgacagacctaaaaattcaggcgatagaaaatctggaggttttggtcgaagacgt
agagaaagatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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