KEGG   Prevotella sp. oral taxon 299: HMPREF0669_00804
Entry
HMPREF0669_00804  CDS       T02809                                 
Name
(GenBank) hypothetical protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pro  Prevotella sp. oral taxon 299
Pathway
pro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMPREF0669_00804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pro03019]
    HMPREF0669_00804
   03009 Ribosome biogenesis [BR:pro03009]
    HMPREF0669_00804
Enzymes [BR:pro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HMPREF0669_00804
Messenger RNA biogenesis [BR:pro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HMPREF0669_00804
Ribosome biogenesis [BR:pro03009]
 Prokaryotic type
  rRNA helicases
   HMPREF0669_00804
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 UvrA_inter NADH-UOR_E
Other DBs
NCBI-ProteinID: EFC71099
UniProt: D3IBK0
Position
unnamed:complement(1279843..1281753)
AA seq 636 aa
MLGISEEIRQAIEELGFEHPTPVQEEVIPYLLGEGNDVIALAQTGTGKTAAYGLPLIQKV
NPQQKHTQALILSPTRELCLQISDSLSDFSKYIKGLTVVPVYGGTSIETQIKALKKGTQI
IVATPGRLIDLIHRGVAKLENVTNVVLDEADEMLNMGFSESINEILECVPKDRNTLLFSA
TMSKEIERIARNYLTNHKEIVVGSRNEGAESVNHIYYMVNAKDKYLALKRIVDYYPSIFA
IIFCRTKRETQEIADKLIHDGYNAEALHGDLSQQQRDLTMQKFRKHTTQFLVATDVAARG
LDVDDLTHVINFGLPDDIESYTHRSGRTGRAGKKGTSISIMHTRERSKMHAIEKVISKAF
VEGEIPDAKAICSKQLYKVMDQILKADVNEEEIAPFLSEINRHFEYVDKEDIIKKIVSME
FGKFLEYYANAPIIEKPSRGRGEDRGSKGNRRDGSGQRRSGERRAPRAVESGFKRLFINL
GKADGFYPGEIMQFINKNVKGRQQVGHIDLLDKISYIEVPERDANKVMKALSGSIYKNRE
VRCNDAEEGSNGKKGRSTGGRNAGGDSDNRYEKRSRQRNSNGERRQGGRNSKGYNTERGE
ELGDWRQFFNEKKVNLRGEEPDFSEDGWARRKPKKK
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgttaggcattagcgaagagattcgccaagccatcgaagaattaggttttgagcatcca
acacctgtacaagaagaagttattccatatttattaggagaaggtaacgatgttattgca
cttgcacaaacaggaactggcaaaacagcagcatacggtttaccactcattcaaaaagtt
aatccacaacaaaagcacactcaagcactcatattatcacctactcgtgagctatgtttg
cagatttctgacagcttaagcgacttttctaaatatatcaaaggcttaactgtggtgcct
gtttatggtggtacatctattgaaacacaaattaaagcacttaaaaaaggtactcaaata
attgtagcaacaccaggacgactcatcgatttgattcatcgtggggtggcaaagctcgaa
aatgtaaccaatgttgtgctagatgaagccgatgaaatgttgaatatgggtttctctgaa
agcattaacgaaattttagagtgtgttcctaaagatagaaacactttgcttttctcggct
acaatgagtaaagaaatagagcgaattgcacgcaattatctcaccaaccacaaggaaata
gttgtaggaagccgtaacgaaggagccgaaagtgttaatcatatctactatatggtgaac
gcaaaggacaaatatcttgcactaaagcgcatcgtagactattatccaagcatctttgca
attatcttctgtcgcacaaaacgtgaaactcaagagattgccgacaagcttattcacgat
ggatacaacgctgaagcactgcacggagacctctctcaacaacaaagagacctcactatg
cagaaatttagaaagcatacaacgcagtttctcgttgcaaccgacgtggcagcacgtggc
ttagacgttgatgatcttacacatgttatcaactttggattgcccgatgacatcgaaagt
tacactcaccgaagcggaagaacaggtagagcaggtaagaaaggtacatctatttcgatt
atgcacacccgtgaacgcagtaagatgcacgccattgaaaaggtgattagcaaagctttc
gttgaaggagaaatacccgatgcaaaggcaatatgcagcaaacagctttacaaggtgatg
gaccaaatattgaaagcagacgtgaacgaggaagaaatcgcacctttcttgtcggaaatc
aatcgtcactttgaatacgtagacaaagaagatatcatcaaaaagattgttagtatggag
tttggtaaattccttgaatactatgctaacgctcctattatcgagaaaccaagtagagga
agaggcgaagaccgaggctcgaaaggcaacagaagagatggtagtggacaacgaagaagt
ggcgaacgccgtgcacctcgtgcagtagagtcgggatttaagcgtcttttcatcaaccta
ggaaaggccgatggcttctatccaggcgagataatgcaattcatcaacaaaaatgttaag
ggcagacaacaagttggtcacatcgatcttctcgacaaaatatcttacattgaggttcct
gaaagagacgcaaacaaggtgatgaaggctctaagcggaagcatttacaagaatagagag
gttcgttgtaacgacgcagaagaaggatctaacggcaaaaaaggacgctcaactggtggc
agaaatgcaggtggcgactcggacaatagatacgaaaaacgctcaagacaacgcaattca
aatggcgaaagacgtcaaggcggaagaaactctaaaggttataacactgaaagaggcgaa
gaattgggcgactggcgtcagttctttaacgagaaaaaggtgaacctaagaggtgaagaa
ccagactttagcgaggatggttgggcacgtcgtaaacctaaaaagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system