KEGG   Prosthecochloris sp. CIB 2401: Ptc2401_02224
Entry
Ptc2401_02224     CDS       T04424                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
proc  Prosthecochloris sp. CIB 2401
Brite
KEGG Orthology (KO) [BR:proc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:proc03032]
    Ptc2401_02224 (topA)
   03400 DNA repair and recombination proteins [BR:proc03400]
    Ptc2401_02224 (topA)
Enzymes [BR:proc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Ptc2401_02224 (topA)
DNA replication proteins [BR:proc03032]
 Prokaryotic type
  DNA Topoisomerases
   Ptc2401_02224 (topA)
DNA repair and recombination proteins [BR:proc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Ptc2401_02224 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 zinc_ribbon_2 Toprim_3 Toprim_2
Other DBs
NCBI-ProteinID: ANT65951
UniProt: A0A1B1Q535
Position
2328277..2330670
AA seq 797 aa
MATSAKASAKNKTLIVVESPSKAKTINKYLGKDYEVFASVGHIKDLPKKEIGLDFDNHYE
PRYEVISGKEKVVRQLRKLAAESSGIMIATDPDREGEAIAWHIANEVESANKPVHRVLFN
EITRNAILDAVKEPRQIDYRLVRSQQTRQGLDKIVGYKISPFLWNVVFRGLSAGRVQSVA
LRLICEREEEILGFEPKEYWTLKADFTTTAGEKFTARLAKIDNKDVEIGTQQEAEAAAEA
ILSKTYSVMDISSRVQQRRQPTAFTTSLLQQAASNQLGFGSKKTMRTAQQLYEGIEIGSE
GATGLITYMRTDSTRIGKEAADEAREFINREFGSDYAGSGGSDKKSKKTQDAHEAIRPTS
VGKTPEALKPYLTSDQYKLYDLIWKRFIASRMTPAKIEQTRVDITDNDARFLFRANGSKI
MFPGFLKVYGDQKELDYEARKSTKEEDEQEQDVRLPKELAPNEHLNLQELDRKQSFSRPP
ARYTEASLVKELDNYGIGRPSTYASIFSTLQDRRYVELQKRKILPTELGMDVSKILVANF
PDLFNVEFTAKMEDELDKVAAGKDEYEQVLESFYRPLEATLSDRRNNPFVPQNKEAEVCP
KCGKGRMVVKWTTSGKFLGCSNYPACRNIKPISSSKPKARETGIACPICNDGRMLLRNGR
FGPFLACSNYPKCDSLLNLDKNRKIQPPKTPPLETDLPCPKCGAPLYLRTGKRGLWLGCS
KFPKCRGRQAWGQLDPEIRNHWEEVMRQHLAAFPDITIKMVDGTPLDMQMSVDDIILLSE
ERGLISAETGEEAAITK
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggctacttccgcgaaagcatcagcaaaaaacaaaaccctcattgtcgttgagtctccg
tccaaggccaagactatcaacaagtaccttggcaaggactacgaagtgttcgcgtctgtc
ggacacatcaaagacctcccgaaaaaagagattggcctggatttcgacaatcactacgag
ccaaggtacgaagtcatttctggtaaggagaaggtggttcgtcagctcagaaaacttgct
gcagaatcatcagggatcatgatcgccactgaccctgaccgcgaaggggaagcaatcgcg
tggcatatcgccaacgaagtggaaagcgcaaacaaaccagtgcaccgggttcttttcaac
gaaatcaccaggaatgcgatacttgacgccgtcaaagaaccccggcagatagattaccgc
ctggtccgctcacagcagacccgccaagggctggacaagattgtcggctacaagatcagc
ccgttcctctggaacgttgtcttcagggggctctctgcgggcagggtccaatccgtggca
ctccgcctgatctgtgaacgcgaagaagagattctgggttttgagcctaaggaatattgg
accctgaaagccgatttcaccacaaccgccggggagaaattcacggcacgactggcaaag
attgacaataaggatgtggaaatcggaacacagcaggaagccgaagccgcagccgaagcg
atactttcgaagacctacagcgttatggatatctcctcgagggttcagcagcgccgccag
cctactgcattcaccacctcgctactgcagcaggcagcttcgaaccagcttgggttcggc
tcgaaaaaaacaatgcggacggcgcaacagctttacgaaggtatagaaatcggctctgaa
ggagcgacaggccttatcacgtatatgcgtaccgactcgacacgcattggcaaggaagcc
gctgatgaagccagggaatttattaaccgggagttcggcagtgactatgctggcagtggt
ggatcagataaaaaatcgaaaaaaacccaggatgctcacgaagcgattcgcccgacctcg
gtcggaaaaactccggaagcactcaagccctaccttacatcagaccaatacaagctctac
gacctcatctggaaacgctttatcgcctcccggatgactccggcaaaaatcgaacagacg
agagtcgatatcacggataatgacgcaaggttccttttcagggccaacggaagcaaaatc
atgttccccgggttcctcaaagtgtacggcgaccagaaagagcttgactacgaagcacga
aagtcgaccaaagaggaagacgagcaggaacaggacgtacggcttccgaaggaacttgcg
cctaacgagcacctgaacctgcaggagcttgacaggaagcagagcttcagccggccacct
gcacgctatacagaagcaagcctggtcaaggaactggacaattatggcatagggcgacca
tcaacctatgcgtcgatattctcgacactgcaggatagacggtatgtcgaactccagaaa
cgcaagatcctgccgacagagctaggtatggatgtctcgaaaattctcgttgccaacttc
cctgacctcttcaacgtcgaattcacggcgaaaatggaagacgaactcgacaaggttgct
gcaggcaaggatgaatacgaacaggttctcgaaagcttttaccggccgcttgaggcaacc
ttgagtgaccgtcgtaataacccgttcgtcccccagaacaaggaagcggaagtctgcccg
aaatgcggcaaaggacgcatggttgtcaaatggacgacaagcggaaaatttctcgggtgc
tccaactatccggcatgccgtaacatcaagcccatctcgagctcgaaaccgaaggcgagg
gaaaccggtatagcctgcccgatttgtaacgatggcaggatgctccttcgtaacgggcgt
ttcggtccattccttgcctgttcaaactacccgaaatgcgattcgctcctgaacctggac
aaaaaccgcaagatacagccaccgaaaacccctccgctcgagacggacctcccatgccct
aaatgcggtgcgccactctacctgcgtacaggaaagcgcggcctgtggctgggatgctcg
aagttcccgaaatgcaggggacggcaggcatgggggcagctagatccggaaataaggaat
cactgggaggaagtcatgcgacagcaccttgcagcttttcccgacattaccataaaaatg
gttgatggcaccccgcttgacatgcagatgagtgttgacgatatcatcctcctctcagag
gaacggggactgatctccgctgaaacaggagaagaggctgccatcacaaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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