GenomeNet

Database: PROSITE
Entry: PS50079
LinkDB: PS50079
Original site: PS50079 
ID   NLS_BP; MATRIX.
AC   PS50079;
DT   AUG-2006 (CREATED); APR-2007 (DATA UPDATE); APR-2006 (INFO UPDATE).
DE   Bipartite nuclear localization signal profile.
MA   /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=17; TOPOLOGY=LINEAR;
MA   /DISJOINT: DEFINITION=PROTECT; N1=1; N2=17;
MA   /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0; R2=1.0; TEXT='RScore';
MA   /CUT_OFF: LEVEL=0; SCORE=4; N_SCORE=4.0; MODE=1; TEXT='*';
MA   /CUT_OFF: LEVEL=-1; SCORE=3; N_SCORE=3.0; MODE=1; TEXT='*';
MA   /DEFAULT: D=*; I=*; B0=*; B1=*; E0=*; E1=*; MD=0; DM=0; M0=*;
MA   /I: B0=0; B1=0;
MA   /M: SY='B'; M=*,*,*,*,*,*,*,*,0,*,*,*,*,*,0,*,*,*,*,*;
MA   /M: SY='B'; M=*,*,*,*,*,*,*,*,0,*,*,*,*,*,0,*,*,*,*,*;
MA   /M:
MA   /M:
MA   /M:
MA   /M:
MA   /M:
MA   /M:
MA   /M:
MA   /M:
MA   /M: D=0;
MA   /M: D=0;
MA   /M: SY='B'; M=0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0;
MA   /M: SY='B'; M=0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0;
MA   /M: SY='B'; M=0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0;
MA   /M: SY='B'; M=0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0;
MA   /M: SY='B'; M=0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0;
MA   /I: E0=0; E1=0;
CC   /MATRIX_TYPE=localization_signal;
CC   /SCALING_DB=none;
CC   /SKIP-FLAG=TRUE;
CC   /AUTHOR=K_Hofmann, N_Hulo;
CC   /VERSION=2;
PR   PRU00768;
DO   PDOC00015;
//
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