KEGG   Pseudoalteromonas rubra: AT705_06260
Entry
AT705_06260       CDS       T04179                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
prr  Pseudoalteromonas rubra
Pathway
prr02024  Quorum sensing
prr03060  Protein export
prr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:prr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AT705_06260
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AT705_06260
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AT705_06260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prr02044]
    AT705_06260
Enzymes [BR:prr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AT705_06260
Secretion system [BR:prr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AT705_06260
  Eukaryotic Sec-SRP protein
   AT705_06260
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA cobW YqeC AAA_33 AAA_31 APS_kinase AAA_14 ATP_bind_1 KTI12 AAA_30 TsaE SurA_N AAA_16 ABC_tran Thymidylate_kin AAA_24 DO-GTPase1 Helicase_RecD AAA_17
Other DBs
NCBI-ProteinID: ALU42588
UniProt: A0A0U3IGP6
Position
1:complement(1394303..1395682)
AA seq 459 aa
MFENLQERLGKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELNLAAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLAQEVDVEFFPSDISQKPVDIATNAIAHAK
KKFIDVVLVDTAGRLHVDNEMMGEIKDLHAAISPIETLFVVDSMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFIGVGERTDALEPFHPDRVASRILGMGDV
LSLIEEVESKVDKDKAAKVAEKVFKGDGFTLEDFAEQLRQMKNMGGMMSMLDKLPGMSNL
PDAVKGQVNDKTFNQMEAIINSMTPHERARPEVIKGSRKKRIAAGSGTQVQDINKLLKQF
TQMQKMMKKMKGKGGMMKMMKNMKGMMPPGMFGGGGPKF
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtttgagaacctccaagaacgcttaggaaaaacgcttaaaaacatcagcggccgtggc
cgactaaccgaagacaatattaaagaaacgctccgtgaagtgcgtatggcgctgcttgaa
gcagacgtagctttgcctgtggtcagagactttgtgaagcaggtcaaagagcgtgcggtt
ggtgttgaagtgactaagagccttagcccgggccaggttttcatcaagatcgttcgtgaa
gagctcgaaaaagctatgggggaggccaacgaggagctgaacctggcagcgcagccacct
gcggtcgttatgatggccggcctgcaaggtgcgggtaaaaccaccagtgtgggtaaactg
gctaagtttttaaaagagcgtaagaaaaaatctgtgctggtagtcagtgctgacgtatac
cgtcctgcggcaatcaaacagcttgaaacgctggcccaggaagtggacgttgaatttttc
cccagtgatatttcgcaaaagccggtggacatcgcgacgaatgcaattgcgcatgcgaag
aaaaaattcattgacgtggtgctggtggatactgccggtcgtttgcacgtcgataatgag
atgatgggcgagatcaaagatctgcacgcagctatctctccgattgaaaccctgttcgtt
gtggactccatgaccggtcaggatgccgcaaatactgcaaaggcctttgacgaagctttg
ccactgacaggtgtgatcctgaccaagaccgatggtgatgcgcgtggtggtgcggcttta
tctattcgtcatatcacgggcaaacctattaagttcatcggtgttggtgagcgtacggat
gcactggaacccttccacccggatcgtgttgcgtcacgtattcttggcatgggcgacgtg
ctgtcattgattgaagaagttgagtctaaggttgataaagacaaagcggctaaagtcgct
gagaaagtctttaaaggcgatggcttcacgctcgaagactttgctgagcagctgcgccag
atgaaaaacatgggcggcatgatgtcgatgctggataagctccctggcatgtctaactta
ccggatgccgtgaaaggtcaggtgaatgacaagacctttaatcagatggaagccatcatt
aactctatgacaccacatgagcgcgcgcgccctgaagtgattaaaggctcgcgtaagaag
cggattgcggccggttccggtactcaggttcaggatatcaacaaattgcttaagcagttt
acccagatgcagaaaatgatgaaaaaaatgaagggtaaaggcggcatgatgaaaatgatg
aagaacatgaaaggtatgatgccaccaggcatgttcggtggtggtggtccgaagttttaa

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