KEGG   Planococcus rifietoensis: AUC31_17160
Entry
AUC31_17160       CDS       T04201                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
prt  Planococcus rifietoensis
Pathway
prt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AUC31_17160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prt03400]
    AUC31_17160
Enzymes [BR:prt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AUC31_17160
DNA repair and recombination proteins [BR:prt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AUC31_17160
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C T2SSE nSTAND3 PIF1 UvrD-helicase AAA_19 AAA_11 AAA_30 zinc_ribbon_12 zinc-ribbons_6 zf-CHY
Other DBs
NCBI-ProteinID: ALS76841
UniProt: A0A0U2N7M4
Position
complement(1793473..1795869)
AA seq 798 aa
MIAEVIVDVAAHPIDRPFDYAVPEKFQALTEPGMRVKVPFGNRKVLGFITTIKETSEFDP
KRLKPIHELMDVVPVLNGEMLELAQWMKRQTVCFEIDALQVMVPAALRAKYEKRFVLNAA
IEELPKELHPYFGTRDFVRAQEAEAVYGLMKKEMDKGTVLADTNIQQKTGVKKIRMVHIT
DSTEDIENISIRANAKQQLKLQEFFLKHVGQSFESSQLQKQAGVSLPTINALAEKGLANF
SSMESYRDPSLLTAIEQKIALDLTNEQQTAFDAIQSSLNTENTFLLHGITGSGKTEIYLQ
TIAQVLEEGKEAIMLVPEISLTPQMTIRFKERFGDLVAVLHSGLSAGEKYDEWRKIQRAE
VKVVVGARSAIFAPFQNLGLIILDEEHESSYKQDDSPRYHARDVAIWRSQQHQCPVILGS
ATPSLESYARAQKGVYELLALKNRAKNQPLPEVHIVDMREELRTGNRSMFSVELAEAIRE
RLARKEQVVLFLNKRGYSSFVLCRDCGTVLQCPNCDISLTYHRASERMKCHYCGYDEPVP
TTCPECESDHIRFFGTGTQKVEEELAKLVPDARVLRMDVDTTRNKGAHEKILSAFGEGKA
DILLGTQMIAKGLDFPNITLVGVLSADTTLHLPDFRAAEKTYQLLTQVSGRAGRDVLPGE
VYVQTYTPEHYAITLAKDQLYEPFYEQEMAMRRASGYPPYYYVVNIQFTHEDLMTVSGYA
QQMTEYLRHRLSPKTIIIGPSASLIARVNNRYRYQCLIKYKNEPKLAEALQQLIKIYRSD
WIKTGATLSIDMNPTTVM
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgattgccgaagtcatcgtcgatgttgccgcacatccgattgaccggccattcgattat
gcagtgccggaaaaattccaggcactcaccgagccaggcatgcgcgtcaaagtgcctttt
ggcaatcgcaaagtgctcggctttattacgactatcaaagaaacgtctgaatttgaccca
aaacggctcaagccgatacacgaattgatggatgtcgtgcccgtactgaacggggaaatg
ctcgagcttgcacaatggatgaaacgccagacagtgtgttttgaaatcgatgccctgcaa
gttatggtaccagcagcacttcgcgcgaaatacgagaagcggttcgttttgaatgctgct
attgaagagctgccgaaagagctgcatccgtatttcggcacacgtgactttgtccgtgcc
caggaagcggaagcggtctatgggctgatgaaaaaagaaatggacaaaggaacggtactt
gcggatacgaacatccagcagaaaaccggcgtgaaaaaaatacgcatggtccatattaca
gattcaactgaagatatagaaaatatttccataagagcgaacgccaagcagcaattgaag
ctgcaggagtttttcttgaaacatgtgggccaaagctttgaatcttcccaactgcaaaag
caggcgggggtctcgcttccgacgatcaatgcattggcggaaaaaggcttggccaatttt
tcgtctatggaatcgtaccgggatccttcacttctgacagcaattgaacaaaagatcgcc
ttggatttgacgaatgaacagcaaacagcattcgatgctattcaatcctcgctcaacacg
gaaaatacctttttgcttcacggcatcaccggcagcggaaaaacggagatctatttgcag
acaatcgcccaagtgcttgaagaaggcaaggaagcgatcatgctcgtaccggaaatttcc
ttgacgccccagatgaccatccgtttcaaggagcgtttcggcgatttagtcgcagtactg
cacagcggcttatcggcaggggaaaaatacgatgaatggcgaaaaatccagcgtgcggaa
gtgaaagtcgtcgtaggggcccgttcggcgatttttgcaccgtttcaaaatcttggtttg
atcatcctcgacgaagagcatgaatcgagctataaacaagacgactcgccccgctaccac
gcacgggatgtggcaatttggcgaagccagcagcatcaatgccccgtcattcttggaagc
gcgacgccatcacttgaatcgtatgcgcgcgcccaaaaaggcgtctatgaattactggcg
ctgaaaaaccgggcgaaaaaccagccgctgcctgaggttcatattgtcgatatgcgcgaa
gagctgcgcaccggcaaccggtcgatgttttctgtggaattggcagaagcgatacgggag
cgcctggcgcggaaagagcaagtcgtgttgtttttgaacaagcgcggctactcgtcattc
gtcttatgccgcgattgcggaacggtgttgcaatgcccgaactgcgatatttcgctaacc
tatcaccgggcgagcgaacgcatgaaatgccattattgcggctatgatgaacccgtgcct
acgacttgcccggaatgcgaaagcgaccatatccgctttttcggcacagggacccaaaaa
gttgaagaggaactggcgaagctcgtgccggatgcgcgcgtgttgcggatggatgtcgat
acgacccgcaataaaggcgcacatgaaaagatcttgtcagcattcggcgagggcaaagcc
gatattctcctcggcacgcaaatgatcgccaaaggcttggatttcccgaatattacattg
gtcggtgtcttatcagcggatacgactttgcatttgccggatttccgggcagctgagaaa
acctatcaattattgacgcaagtgagcggacgtgcaggacgcgacgtattgccgggagaa
gtgtatgtgcagacctatacgccggagcattatgcgatcacgctcgcaaaagaccaatta
tacgaaccattctatgagcaggaaatggccatgcggcgggcgagcggataccctccgtat
tattatgtcgtcaatatccagttcacccatgaggatttgatgacggtgtcgggctatgcc
cagcagatgactgaatacctgcgccaccgcctgtcgcccaaaaccattattatcgggcct
tccgcatcgctcattgcgcgtgtgaacaatagatatcgctatcaatgtttgataaaatac
aaaaatgaaccgaagctggctgaagcgctgcagcaattgatcaaaatctaccgcagcgac
tggattaaaacgggtgcaactttgtccatcgacatgaatccaacaacagtcatgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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