KEGG   Psychrobacter sp. PRwf-1: PsycPRwf_0164
Entry
PsycPRwf_0164     CDS       T00541                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
prw  Psychrobacter sp. PRwf-1
Pathway
prw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PsycPRwf_0164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prw03019]
    PsycPRwf_0164
   03016 Transfer RNA biogenesis [BR:prw03016]
    PsycPRwf_0164
Enzymes [BR:prw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     PsycPRwf_0164
Messenger RNA biogenesis [BR:prw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PsycPRwf_0164
Transfer RNA biogenesis [BR:prw03016]
 Prokaryotic type
  tRNA degradation factors
   PsycPRwf_0164
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 Band_7_1 S1_2
Other DBs
NCBI-ProteinID: ABQ93123
UniProt: A5WBT2
Position
193089..195203
AA seq 704 aa
MSMFNTISREFQYGNEQVVIETGRIARQANSVLVHMGGVSVLVAVVVKSDAKEGQNFFPL
TVNYQEKMYAAGKIPGAYGKREGRPTEFETLTSRLIDRPIRPLFPEGYVNEIQITATVIS
SDKKHYADIAAMIGASAALSISDAPFNGPIGGARVGFINGEYVLNPSIEELKSSDLDLVV
AGTKSAVLMVESEAAELSEDQMLGAVLYGHEQQQIVIDNIAELAKAVGTQKQDFVAPELN
AELKEKVTTQFGEQVAEAYAISDKQARYEKLDEIKAAAIDALAGDPESEEFAEKEAQIKE
IYNDLKYRTVRDAILSGKPRIDGRDLDTVRALDIQVGVLPYTHGSALFTRGETQALVTTT
LGNSRDVNLIDSLAGTIQDHFMLHYNFPHYSVGETGREGVPKRREIGHGRLARRGVQAML
PDSDRFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGDRF
AVLSDILGDEDHLGDMDFKVAGTKDGITALQMDIKIEGITSDIMEKALEQAHAGRIHILN
AMNEVLPASRTEINAHAPNYAVIEINSDKIRDVIGKGGATIRQLTEDTGAVIDIDDNGTI
RIFGENKAATKEAIRQIEAITAEVEVGKVYKGTVARVVDFGAFVTVLPGTDGLVHISQIA
DERVESVSDYLSEGQQINVLVQDVDNRGRIKLTMKGVEQEQTQA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtcaatgtttaataccatctctcgagagttccagtacggcaacgaacaagttgttatt
gaaaccggtcgtatcgcacgacaagccaattcagtattggttcatatgggcggcgtatca
gtattggtcgctgtggttgtaaaaagcgatgctaaagaaggtcaaaacttcttcccgcta
accgtcaactatcaagaaaaaatgtacgctgctggtaaaattccaggcgcttacggcaaa
cgtgaaggccgtcctactgagtttgaaaccctaacctcacgtctcattgaccgtcccatc
cgtcctttattcccagaaggttatgtcaacgagatccagattactgccacagtcatctca
agtgacaaaaagcactatgctgatatcgctgccatgattggtgcttcagctgcactttca
atctcagatgcgccgtttaatggccctattggtggtgcccgcgtaggctttatcaatggc
gaatacgtgcttaacccctcaattgaagagttaaagagcagtgatcttgacttagtagtg
gcgggtactaaatcagcggtattaatggttgagtcagaagctgctgagctgtctgaagac
caaatgctgggcgctgtattgtacggtcatgaacagcagcaaattgttatcgataatatt
gctgagctggccaaggccgtgggaactcaaaaacaagactttgtggcacctgagctaaat
gctgagttaaaagaaaaagtaaccacacagtttggtgagcaagtggctgaagcttatgcc
attagcgataagcaagcacgctacgaaaaactagatgagatcaaggctgcggctattgac
gccttagcaggtgaccctgagtcagaagagtttgctgaaaaagaagctcaaattaaagaa
atctataatgatctaaaatatcgcaccgttcgtgacgccattttgtcaggtaagccacgt
atcgatggtcgtgatttagataccgttcgtgcgctagatattcaagtaggtgtattgcct
tacactcatggttcagcgctatttacccgtggtgagacgcaagctctagtcaccacgact
ttaggtaattcacgtgatgtaaacttgattgactcgctagcgggtactatccaagatcat
ttcatgctgcattacaacttcccgcattattcagtgggtgaaactggccgtgaaggcgtg
ccaaagcgtcgtgaaattggtcatggccgtctggctcgccgtggtgttcaagccatgctt
ccagacagcgaccgcttcccatacgttatccgtgtggtgtctgagattactgaatcaaat
ggttcgtcttcaatggcgtcagtttgtggtgccagccttgccttaatggatgccggtgtg
ccgttaaaagccccagtagctggtatcgctatgggtctggtcaaagaaggcgaccgcttt
gctgtcttatcagatatcctaggtgatgaagatcatttaggtgatatggactttaaagtg
gccggtactaaagatggtatcacagccttacagatggatattaagattgaaggtatcacc
tcagatatcatggaaaaagcacttgagcaagctcatgccggccgtatccatatcttaaat
gccatgaacgaagtattgccagccagccgtactgaaatcaatgcccatgcaccaaactat
gcggtcatcgaaatcaattctgataaaatccgtgatgtgatcggtaaaggcggcgcaacc
atccgtcaattaaccgaagacaccggtgcggttatcgatattgatgacaatggtaccatt
cgtatctttggtgaaaacaaagccgcgaccaaagaagccatccgtcaaatcgaagccatc
accgctgaagtggaagtgggcaaagtatacaaaggcaccgttgcgcgcgttgtagacttt
ggtgcattcgtaacggttttaccaggtactgatggtctggtacacatctcacaaatcgct
gatgagcgtgtagagagcgtatcggattacctaagtgaaggccaacaaatcaatgtgttg
gtgcaagatgtagacaaccgtggtcgcatcaaattaaccatgaaaggcgttgagcaagag
cagactcaagcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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