KEGG T00541: PsycPRwf

Psychrobacter sp. PRwf-1: PsycPRwf_0266

Entry

PsycPRwf_0266 CDS T00541

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

prw Psychrobacter sp. PRwf-1

Pathway

prw00020	Citrate cycle (TCA cycle)
prw00310	Lysine degradation
prw00380	Tryptophan metabolism
prw01100	Metabolic pathways
prw01110	Biosynthesis of secondary metabolites
prw01120	Microbial metabolism in diverse environments

Module

prw_M00009	Citrate cycle (TCA cycle, Krebs cycle)
prw_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:prw00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:prw00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:prw00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

313445..316321

AA seq 958 aa
MNTMTNDALKADATELAGDNATYIESLYEQYLQDPSSVDADWQAYFKNYQSDNDALHHAI
QDQFLLLARNQTANKGAAAPATSGSLDSNCVDPRHMGVQKLISAYRRRGHRRAKLDPLGL
QPRADVEDLTLAYHGLSEADLDTIFSTSDLNIGKSEASLREIIEIMERVYCGHIGLEYMH
VTTSTEKRWFENYMETNLGYIKFDNEKKKEILERLTAAEGLEKYLARKYTGVKRFGLEGG
ESFIPAVHEIIQRAGGYGTKEMVIGMAHRGRLNLLVNILGKNPADLFDEFDGKVMPEKGS
GDVKYHNGYSSNVMTPGGEAHLALAFNPSHLEIVSPVLEGSVRARQVRRNDKDGNLVLPL
VVHGDAAIAAQGVVQETFQMSQTRAYTTGGTVHIVINNQVGFTTSRQEDARSTEYCTDIA
KMVHAPILHVNGDDPEAVVFAAQMALDYRHEFHKDIVIDLFCYRRNGHNEADEPSATQPL
MYSIIKKLPTTRTQYAQKLMSQGVISEGDDKTLEDEYREALDKGEYVANSLVQQPNEELY
VDWSPYLGHELKDDWDTSVDIEKLKAYGRRMAEMPEGFKLQRQVQKVVEQRLAMQTGEEP
LNWGAAETLAYASLVDEDFLVRITGEDVGRGTFSHRHSEIFNVENGDMYVPLAHLNDTQA
RFATYNSLLSEEAVLAFEYGYATTVPKALIIWEAQFGDFVNGAQVVIDQFISSGETKWQR
VCGLTMLLPHGFEGQGPEHSSARLERFLQLCAEDNMQVITPTTPAQIFHALRRQAVRPIR
KPLVVMSPKSLLRHKLATSELEELANGKFETVLPEIDQLDNDKVTRIVMCGGKVYYDLLE
QRRELGLDHVAIVRIEQLYPLPQQRMVEEVQKYANLEEIVWCQEEPLNQGAWYYLAPHMF
RIFGPQADNQPRVTKARVVDPVARPASAAPATGLPSIHVRQQRELVAGGLGVSVDQLK

NT seq 2877 nt +upstreamnt +downstreamnt
atgaatactatgactaatgatgccttaaaagccgatgctacagagcttgcaggggacaac
gctacctatatcgagtctctatacgagcagtatttacaagacccaagtagtgtagatgct
gattggcaagcttatttcaaaaactatcaaagcgacaatgatgccctgcatcatgccatc
caagatcagttcttactgttagcccgtaatcaaacggctaataaaggcgctgcggctcct
gctacctcaggtagcttagattccaactgcgttgatccaagacatatgggcgtacaaaag
ctaatttcagcttatcgccgtcgtggtcatcgccgtgccaagcttgatcctttaggtcta
cagccacgtgcggatgtagaagacctaaccttagcgtatcatggtctatcagaggcggat
ctagacaccatcttctcaaccagtgacttaaacattggtaagagcgaggcgagcctacgc
gaaatcatcgaaatcatggagcgtgtgtactgtggccacatcggtcttgagtacatgcac
gtgacgaccagcactgagaagcgctggtttgaaaactacatggaaaccaacctaggctac
atcaagtttgacaacgagaagaaaaaagagattcttgagcgtctaactgcggccgaaggc
ctagagaaatacttagcacgtaaatacaccggtgttaagcgcttcggtcttgagggcggt
gaaagctttattccagcggttcacgaaattattcagcgtgcaggtggctacggtaccaaa
gagatggttatcggtatggctcaccgcggccgcttaaacctattggttaatatcttgggt
aaaaacccagcggacttatttgatgagttcgatggtaaagtcatgccagaaaaaggctca
ggtgacgtaaaataccacaatggttattcatcaaacgtgatgacaccaggtggtgaggcg
cacttagcattggcctttaacccatcacatctagaaatcgtttctcctgtacttgaaggc
tcagtacgtgcccgtcaagttcgccgcaatgacaaagatggtaacttagtattgccattg
gtagtacatggtgacgctgcgattgctgcgcagggtgtggttcaagaaactttccagatg
tcacagacccgtgcttacaccacaggcggtaccgttcacattgttattaacaaccaagtg
ggctttactaccagccgtcaagaagacgctcgctctacagagtactgtactgacatcgcc
aaaatggtgcacgcaccaatcttacacgtcaatggtgatgatcctgaagcggttgtattt
gcggctcaaatggcattagattatcgtcacgagttccacaaagacatcgtgattgactta
ttctgctaccgccgtaacggtcacaacgaagccgatgagccatcagccactcagccactg
atgtactcgatcatcaaaaaactgccaaccacgcgtactcagtatgcccaaaagctaatg
tcacaaggtgttatctctgaaggcgacgacaagacgcttgaagatgaataccgcgaagca
ttagataaaggcgaatatgttgctaactctttagtacagcagcctaatgaagagctgtat
gtggactggagcccctacttaggtcatgagctaaaagatgactgggataccagtgttgat
atcgaaaaactaaaagcctatggccgccgcatggcagaaatgcctgaaggctttaagctt
cagcgtcaagttcaaaaagtagtcgagcagcgcttagcgatgcaaactggtgaagagcct
ttaaactggggcgctgctgagactttagcttatgcctcactagtagacgaagacttctta
gtgcgtattaccggtgaagacgtgggccgtggtactttctcacatcgtcactcagagatt
ttcaacgttgaaaatggtgatatgtatgtgccgctagcgcatttaaatgacacccaagct
cgctttgccacttacaactcattgttgtcagaagaagcggtattggcgttcgaatacggc
tatgcaacgacagtaccaaaagcacttatcatttgggaagctcagtttggtgacttcgta
aacggtgcgcaggtcgtgattgaccagttcatctcaagtggtgaaaccaagtggcagcgt
gtgtgtggtctaaccatgcttctaccacatggctttgaaggtcaaggtcctgagcattca
tcagcccgtttagagcgcttcttgcaactgtgtgctgaagacaacatgcaagtgattacc
ccaaccacacctgcacaaatcttccacgccttacgtcgtcaagcggtacgcccaattcgt
aagccactagtggtgatgtcaccgaagagcttactgcgtcacaaacttgcgacctcagag
cttgaagagcttgctaacggtaagtttgaaactgtactaccagagatcgatcagctagat
aacgataaagtgactcgtatcgtcatgtgtggtggtaaggtctattatgacctactagag
cagcgtcgtgagctgggcctagatcatgtggccatcgttcgtatcgagcagctgtaccca
ttaccacaacaaagaatggtagaagaggttcaaaaatatgccaaccttgaagagattgta
tggtgtcaagaagagccattaaaccaaggcgcatggtactatttagcaccgcatatgttc
cgtatctttggcccacaagctgacaatcagcctcgtgtgaccaaggcacgtgtggtagac
cctgtcgcgcgtcctgcgtcagcagcgccagcaactggtcttccttcaatccatgtgcgt
cagcagcgtgagctggttgccggtggtcttggtgtctcagtagaccaactaaaataa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PRW (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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