KEGG   Psychrobacter sp. PRwf-1: PsycPRwf_0382Help
Entry
PsycPRwf_0382     CDS       T00541                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
prw  Psychrobacter sp. PRwf-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:prw00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PsycPRwf_0382
Enzymes [BR:prw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PsycPRwf_0382
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PsycPRwf_0382
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(457938..458861)
Genome map
AA seq 307 aa AA seqDB search
MPELPEVETTKTSLKPLLKKQVAQVDVYQPKLRWPVPDDIHRLQGYTLQQVERRAKYLIL
QFQRLPSQSGAKTANMPDTKSIIIHLGMSGSLQQFPVGTDKRKHDHLIMQYKADDTKPAI
QLHYHDPRRFGAILWFDDYAEKLFDHLGIEPLDDQFSGDYLFDKIHRVAENAIRSCHNKP
LLKPISRPIKAVIMDQEVVVGVGNIYATESLFLSGIHPITPADQLSKVQLAELVKYIKEI
LKRSITQGGSTLKDFTVASGTTGYFQQTLLVYGKYKSPCPTCGAGIDKVVITGRASTFCP
TCQPEPS
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagtcgaaaccactaaaaccagccttaagcctttgctcaagaaa
caagtggcgcaggttgacgtgtatcagcccaaattgcgctggccggtaccagatgatatt
catcgcttacagggctatactttgcagcaggtagagcgccgtgctaagtatttaatttta
caatttcaacgcctcccctctcaaagtggcgctaaaacagctaatatgcctgataccaag
tcgataatcatccacctaggtatgtcaggcagtcttcaacaattcccagttggcacggac
aagcgcaaacacgatcatttaattatgcaatataaagcggatgatacaaagccagccata
cagctgcactatcatgaccctcgccgctttggggcaattttatggttcgatgactatgcc
gaaaaactgtttgatcatctaggtatagagcccttagatgaccaattttcaggcgactac
ctgtttgataagattcatagagtcgctgagaatgccatccgcagttgtcataacaaaccg
ctgttaaagcccattagtcggcctatcaaagcggtgattatggatcaagaagttgtggtc
ggagtcggtaatatttatgccacagagagtttgtttttatcaggcatccatcctatcacc
cctgccgatcagctgagtaaagtgcagttagctgaactggtaaaatacatcaaagagatt
ttaaaacggtcaatcactcaaggtggctcaactttaaaagactttaccgtagccagtggt
acaaccggatactttcagcaaacactgttggtctatggcaaatataaatcaccttgcccg
acttgtggtgctggtattgataaggtagtaataacaggccgcgccagtaccttttgtccc
acttgtcagcctgagccatcttaa

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