KEGG T00541: PsycPRwf

Psychrobacter sp. PRwf-1: PsycPRwf_2087

Entry

PsycPRwf_2087 CDS T00541

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

prw Psychrobacter sp. PRwf-1

Pathway

prw00020	Citrate cycle (TCA cycle)
prw00480	Glutathione metabolism
prw01100	Metabolic pathways
prw01110	Biosynthesis of secondary metabolites
prw01120	Microbial metabolism in diverse environments
prw01210	2-Oxocarboxylic acid metabolism
prw01230	Biosynthesis of amino acids

Module

prw_M00009	Citrate cycle (TCA cycle, Krebs cycle)
prw_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:prw00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:prw00480]

SSDB

Motif

Pfam:

IDH FMN_red DUF3422

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2604875..2607097

AA seq 740 aa
MSKIIYTKTDEAPALATQSFLPIVQAFTHSADIEVEVSDISLAARILALFPEYLNPEQQV
PDALTELGQLVLKPDANIIKLPNISASIPQLKAAIKELQDKGFAVPDFPDTSSTDKEKEV
RARFDKIKGSAVNPVLREGNSDRRAPKAVKAYARANPHAMKPWRRDSKTHVSTMAHCDFV
DDEKSVTIDKETKYRVVYTDETGTATELKSPAPLLKGELMDTSILCFDVLSNFLQEQVQD
AKAQGLLFSIHLKATMMKVSDPIIFGEAVRVYFKDLFAKHGETFDKLGVNVNNGFAQLLS
KIQELPDDQRQQIEADIQQVYDTNPPLAMVDSDKGITNLHVPSDVIVDASMPAMIRNGGQ
MWGPDGKLHDVNAVIPDSSYAALYDETIRFCKEHGAFDPTTMGTVPNIGLMAQKAEEYGS
HDTTFQMPGKGKIQVIDADGNVLTEHAVKKDDIWRMNRVKDAPIQDWVKLAVTRARASGM
PAVFWLDKNRAHHAALIEKVELYLKDHDTEGLEIHIMPIREATRFTLERLIAGKDTLSVT
GNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEQNHLRWD
SLGEFLALTVSLEHEAEHGTAQNPKAQILADTLSDATEKLLLNNKSPSRKVGELDNRGSH
FYLAMYWAQALAKQDQDASLQQRFAPLAKALADNEDTIVKELNEVQGHQVDIEGYYLPND
EVVKQVMRPSQTFNKILAAL

NT seq 2223 nt +upstreamnt +downstreamnt
atgtcaaaaattatatataccaaaaccgacgaagccccagcgctggccacgcagtcattt
ttacccattgtacaagcatttacgcatagtgccgacattgaagttgaagtcagtgatatc
tcattagccgcccgtattttggcactttttccagagtatctaaaccccgagcagcaagtg
cctgatgcacttaccgagcttggccaattagtgctaaagcctgacgccaatatcatcaaa
ttacccaatatcagcgcctctattcctcagctaaaagcagccattaaagagctacaagac
aaaggctttgcggtgcctgacttcccagatacctccagcaccgataaagaaaaagaagtg
cgggcccgttttgataaaatcaaaggcagtgcggtaaatccggtactacgtgaaggtaac
tcagacagacgcgccccaaaagcggtgaaagcctatgcccgagccaatccacatgccatg
aagccttggcgccgtgactcaaaaactcatgtatctaccatggcacattgtgacttcgtt
gatgacgaaaagtcagtgaccatcgataaagaaaccaagtaccgtgtggtctataccgat
gagaccggtacagctaccgagcttaaatcgcctgctccgctattaaagggggagctgatg
gacacctctatcttatgttttgatgtgctaagcaatttcttacaagaacaagtgcaagat
gccaaggcacagggcctgttattctctattcatctaaaagcgactatgatgaaagtgtct
gacccaatcatctttggtgaggcggtgcgagtttattttaaagacttgtttgccaaacac
ggtgagacttttgacaagctcggtgtcaacgtcaacaatggctttgcccagttgctgtcc
aagattcaagagctgccagatgatcagcgtcaacagatagaggcggatattcaacaggta
tatgacaccaatccgccactggccatggtcgattcagacaaaggcattaccaacttgcat
gtgccaagtgatgtcattgtcgatgcctctatgccagcgatgatccgtaacggtggtcaa
atgtggggccctgatggcaagctacatgatgtgaatgcagtaatccccgacagcagttat
gccgctctttatgatgagaccatccgcttttgtaaagagcatggtgcctttgaccccacc
accatgggcactgtacccaatattggccttatggctcaaaaagccgaagagtatggctcg
catgacaccacttttcagatgccaggcaaaggaaaaatccaagtcatcgatgccgatggc
aacgtgctgactgagcatgcggtcaaaaaagatgacatctggcgcatgaaccgtgtcaaa
gatgcccctatccaagactgggtaaaacttgcagtgacccgtgcccgagccagcggcatg
ccggccgttttctggctggataaaaaccgggctcaccacgccgccttaatcgaaaaagtc
gagttgtacctaaaagaccatgacaccgaaggcttagaaattcatatcatgcccattcgt
gaagcaacccgatttacgcttgagcgtctgatcgctggcaaggatacgctgtcagtcacc
ggcaacgtattgcgtgattatctgaccgatttatttcccatccttgagctgggtaccagt
gctaagatgctatctatcgtgccgcttatgaacggtggcggcctgtttgaaaccggtgcc
ggtggttcagcgcccaaacatgtgcagcagctgctggagcaaaatcatctacgctgggat
tcactgggagagtttttggcattgactgtgtcacttgagcacgaagctgagcatggcacc
gcacaaaacccaaaagcgcaaatcctagccgatactttaagcgatgccaccgagaagctc
ctgctaaacaacaagtcaccttcacgtaaagtgggtgagttggacaaccgcggcagccat
ttttacttggccatgtactgggctcaagcattggccaagcaagaccaagatgccagccta
caacaaagatttgcgccactggctaaagcacttgccgataatgaggatactatcgtcaaa
gagcttaatgaggtgcaaggtcatcaagtggacattgagggttactatctgcccaatgat
gaggttgtaaagcaggtgatgcgcccaagccaaaccttcaataagattttagctgcgcta
taa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PRW (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system