KEGG Psychrobacter_PRwf-1: PsycPRwf

Psychrobacter sp. PRwf-1: PsycPRwf_2099

Entry

PsycPRwf_2099 CDS Psychrobacter_PRwf-1

Gene name fadA

Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)

Orthology K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]

Pathway prw00071 Fatty acid metabolism
prw00280 Valine, leucine and isoleucine degradation
prw00281 Geraniol degradation
prw00362 Benzoate degradation via hydroxylation
prw00592 alpha-Linolenic acid metabolism
prw01100 Metabolic pathways

Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:prw00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:prw00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:prw00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:prw00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:prw00281]

SSDB

Motif Pfam: Thiolase_N Thiolase_C ketoacyl-synt ACP_syn_III
PROSITE: THIOLASE_1 THIOLASE_2 THIOLASE_3

Other DBs NCBI-GI: 148653896
NCBI-GeneID: 5206031
JGI: PsycPRwf2099
UniProt: A5WH98

Position complement(2617934..2619106)

AA seq 390 aa
MTTLSPKDVVIVDGVRTAMGKSKNGMFRNVRADSMSAELVRALVKRNDFDTNEVEDIIWG
CVNQTLEQGMNIGRNIGLLADIPKTAGGQTVNRLCGSSMQALHTAAAQIMTNQGDVFIIG
GVEHMGHVGMMHGIDINPEASKHYAKASNMMGLTAEMLGRMNGITREQQDEFGYESHRRA
WAATQAGRFDNEIIGIEGHDAEGRLQLCTVDEVIRPDTSMESLAKLRPVFDPANGTVTAA
TSSALSDGASAMLVMSAQKAKDLGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAG
LTVEDMQTIELNEAFAAQGLSVLKALNLLDKRDIINVNGGAIALGHPLGCSGARITVTLL
NAMEQMDTEIGLATMCIGLGQGISTVIERV

NT seq 1173 nt +upstreamnt +downstreamnt
atgacaacattaagtccaaaagacgtggtcatcgtagatggcgtgcgtaccgcaatgggt
aaatctaagaacggtatgttccgcaacgttcgtgctgatagcatgtcagctgaattggta
cgtgctttggttaagcgcaatgactttgataccaatgaagtagaagacattatctggggc
tgtgttaaccagaccctagaacaaggtatgaacattggccgtaacattggtttattggct
gatatccctaagactgccggtggccaaaccgttaaccgtctatgtggctcatcaatgcaa
gcgctacacaccgctgccgctcaaatcatgaccaaccaaggtgatgtatttatcatcggt
ggtgttgagcacatgggccacgtgggcatgatgcatggtatcgatattaacccagaagcc
tctaagcattatgcaaaagcgtctaacatgatgggtttgaccgctgaaatgctcggccgt
atgaatggcatcactcgtgagcagcaagatgagttcggttatgaatcacatcgccgtgct
tgggcagccactcaagcgggtcgttttgacaacgaaattatcggtattgaaggtcatgac
gcagaaggtcgcctacagctttgtaccgtagatgaggtgattcgccctgatacctcaatg
gagtcattggctaagctacgcccagtattcgatcctgcaaacggtacagtaactgcagcc
acgtcttctgcattatcagatggtgcttctgcgatgctggtgatgagcgctcaaaaagcc
aaagatttaggtttaaaacctcgtgcccgcatccgcagcatggcaatcgctggctgtgat
gccgctatcatgggttatggcccagtacctgccactcaaaaagcattaaagcgtgctggc
ctaacggttgaagacatgcaaaccatcgagctaaacgaagcgttcgccgctcaaggtctg
tcagtacttaaagcgctaaacttacttgataagcgcgacatcatcaacgttaatggtggt
gccattgctctaggtcacccactgggctgttctggtgcgcgtatcactgtgacgctacta
aatgcgatggagcaaatggatactgaaattggtctggccactatgtgtatcggtctgggc
caaggtatctctactgtgattgagcgtgtttaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PRW (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (4)   
   PROSITE (3)   
All databases (24)

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