KEGG P.syringae_B728a: Psyr

Pseudomonas syringae pv. syringae B728a: Psyr_2523

Entry

Psyr_2523 CDS P.syringae_B728a

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway psb00230 Purine metabolism
psb00240 Pyrimidine metabolism
psb01100 Metabolic pathways
psb03030 DNA replication
psb03430 Mismatch repair
psb03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:psb00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:psb00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:psb03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:psb03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:psb03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti

Other DBs NCBI-GI: 66045759
NCBI-GeneID: 3368040
JGI: Psyr_2523
UniProt: Q4ZTG0

Position 2931657..2934752

AA seq 1031 aa
MTREYAELHCLSNFSFQRGASSARELFERALRHGYKALAITDECTLAGIVRAWQASKSTG
LPLIVGSEMHIENGPKVVLLVENQAGYEALCKLITVARRRAGKGEYRVLREDFEPAPDGL
LALWLPDLDGNAQACLAGGRWLRERFAERLWLGVGLHRGPDDEQRLADLLALAQSLGVPA
VASGDVHMHARGRRALQDTMTAIRHHTTVAEAGHLLFANGERHLRPLDALSEHYPDWLLA
ESVRIARRCTFDLGDLKYEYPHELVPKGQTSTSWLRELTERGVRRRWPGGLTPATRAQVE
KELALIAEKKFDSYFLTVHDIVEFARSQHILCQGRGSAANSAVCYALGITELNPEQSNLL
FERFISRERNEPPDIDVDFEHDRREEVIQYIFRRYGRGRAALTAVASTYHGSGAMRDVAK
VLGLPPEQINALAEAFSRWSDSLPSPERLREYGFDADTPILKRVLALTGELIGFPRHLSQ
HPGGFVISEHPLETLVPVENAAMADRTIIQWDKDDLDLVGLLKVDILALGMLSALRRTFD
LVHLHRGQRWTLATLPGDDRKTYEMISRADTIGVFQIESRAQMAMLPRLRPEKFYDLVIE
VAIVRPGPIQGDMVHPYLRRRNGEEDVTYPPKLESVFKRTLGVPLFQEQVMEVAILAADY
TPGEADELRRAMAAWKRHGGLEPHRERLRTGMLKNGYEADFADRIFEQIKGFGSYGFPES
HAASFALLTYASCWLKCHEPAAFTCALINSWPMGFYSPDQLLQDARRHHIEIRPVDVRYS
DWDCSLEPLDHPDRTRNLAIRLGLRMVRSFREEDALRIEVARAKRPFVDATDLTLRAELD
ARAAEALADSGALRGLIGHRHRARWEVAGVEAQRPLFDDLPSEETQVTLPLPTVAEDLVA
DYTTLGTTLGPHPLALLRRQLAAKRFRSSQDLLHLENDRTLSVAGLVIGRQRPGTASGVT
FVTLEDEFGMVNVVVWRDLAERQRKVLVGSQLLQVFGRLESKSGVRHLIAQRLYDLTPLL
TGLDVRSRDFQ

NT seq 3096 nt +upstreamnt +downstreamnt
atgacccgcgaatacgccgagctgcattgcctgtccaacttcagctttcagcggggtgcc
tcgagcgcacgcgagttgttcgaacgggcgttgcgtcatggctacaaagcgctggcaatc
accgacgagtgcaccctggccggcatcgtacgcgcctggcaggcgtcaaaaagcaccggt
ctgcccttgatcgtcggcagtgaaatgcacatcgaaaacggcccgaaagtcgtcttgctg
gtggaaaaccaggcaggctatgaggcgctgtgcaaattgatcacggtagcgcgccgccgg
gccggaaaaggtgaataccgcgtgttgcgcgaagacttcgagcctgcgccggacgggttg
ctggccctctggctgccggacctcgacggcaatgctcaagcctgtctggccggcgggcgc
tggttgcgtgagcgatttgccgagcgcctgtggctgggtgtcgggctgcaccgcggcccg
gatgacgagcagcggctggccgacctgctggcgctggcgcaatcgctgggtgtcccggca
gtggccagtggcgatgtgcacatgcacgcgcgtggccggcgtgccctgcaggacaccatg
actgccatccgccaccacaccacagtggccgaggcaggtcatctgctgtttgccaatggc
gagcgccatttgcggccactggatgcgctcagcgagcattacccggactggctgctggcc
gagtcggtgcgtattgcccggcgctgcacgttcgacctgggcgatttgaagtatgaatac
ccgcatgaactggtccccaaaggccaaacctctacgtcctggctacgtgagctgaccgaa
cgcggcgttcgcaggcgctggccgggcggcctgacaccggccacccgtgcgcaggtcgag
aaggaactggcgctgatcgcggaaaagaagttcgacagctactttctgaccgtgcatgac
atcgtcgagtttgcccgcagccagcacattttgtgtcaggggcgcggctcggcggccaac
tcggcagtgtgttatgcgctggggatcactgaactgaacccggaacagagcaacctgctg
ttcgagcgcttcatctccagagagcgcaacgagccaccggacatcgacgtggatttcgag
catgaccgccgcgaagaagtcattcagtacatcttccggcgctatggccggggcagggcc
gcgctgacggccgtagccagcacctatcatggctccggcgcaatgcgtgacgtggccaag
gtgctgggcttgccgccagagcagatcaatgcattggccgaagccttcagccgctggagc
gattcactgccgtcgcctgagcgcttgcgcgaatacggcttcgatgccgacacgccgatc
ctcaagcgcgtgctggcgttgaccggcgaactgatcggttttccccggcacctgtcgcaa
cacccgggtggattcgtgatttccgaacacccgcttgaaacgctagtgccggtcgagaac
gccgcgatggccgaccgcaccatcatccagtgggacaaggacgatctggacctggtcggc
ctgctgaaagtcgacattcttgcactgggcatgctcagtgccttgcgccgcacgttcgat
ctggtgcatttgcaccgtggccaacgatggactttggcgactcttccgggcgacgaccgg
aaaacctacgaaatgatcagccgcgccgacaccatcggcgtgtttcagatcgagtcgcgt
gcgcagatggccatgctgccgcgcctcagaccggaaaaattctacgacctggtcatcgaa
gtcgccattgtccggccagggccgattcagggcgacatggttcacccgtacctgcggcgg
cgcaatggtgaagaggacgtcacctatccgcccaagcttgaatcggtgttcaagcgcacc
ctgggtgtgccgctgttccaggagcaggtcatggaagtggccattctggccgccgactac
acgccgggcgaggcggatgagttacgtcgcgcgatggccgcatggaaacgtcacggcggg
ctcgagccgcatcgcgaacggctgcgcacgggcatgctgaaaaacggctacgaagcggac
tttgccgaccggatcttcgaacagatcaagggctttggcagttatggtttccccgaatcc
catgccgccagtttcgccttgctgacctacgccagttgctggctcaagtgccacgaaccg
gcagcgttcacctgtgcactgatcaacagctggccaatggggttctatagcccggatcaa
ttgctgcaggacgcacgccgccatcacattgaaattcgcccggtggatgtgcgttacagc
gattgggattgctcgctggagccgctcgatcatcctgaccgcacgcgcaatctggcgatt
cgtctcgggctgcgcatggtccgtagctttcgtgaagaagatgccttgcgcatcgaagtc
gcgcgcgcgaaacgcccgtttgtcgatgccacggacctgacgttgcgcgccgaactggac
gcgcgcgccgccgaagcgctggcggattccggtgccttgcgcggcctgatcggccatcgg
caccgggcgcgctgggaagtcgccggggttgaggcccagcgcccgctgttcgacgacctg
cccagcgaagaaacccaggtaaccttgccgctgccgaccgtggccgaagacctggtggcc
gactacacgacgctgggcaccaccctgggcccacatccgctggccttgctgcgtcggcaa
ctggctgccaagcgctttcgcagctcacaagacttgttgcacctggaaaacgaccggacc
ctcagcgtggcgggactggtcattggtcgtcaacgaccgggcaccgcgagtggcgtgacc
ttcgtcaccctggaagatgagttcggcatggtcaacgtcgtagtctggcgcgacctggcc
gagcgtcagcgcaaggtgctggtgggttcgcaattgctgcaggtgttcgggcgactggaa
tcgaaaagcggggtgcggcacctgattgcccagcgcctgtacgacctgacgccgctgctc
accggactggatgtgcgcagccgggattttcagtaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PSB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)

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