KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_3944
Entry
Psyr_3944         CDS       T00246                                 
Name
(GenBank) ATP dependent PIM1 peptidase, Serine peptidase, MEROPS family S16
  KO
K01338  ATP-dependent Lon protease [EC:3.4.21.53]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:psb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:psb01002]
    Psyr_3944
Enzymes [BR:psb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.53  endopeptidase La
     Psyr_3944
Peptidases and inhibitors [BR:psb01002]
 Serine peptidases
  Family S16: lon protease family
   Psyr_3944
SSDB
Motif
Pfam: Lon_C AAA LON_substr_bdg ChlI AAA_5 AAA_16 AAA_22 AAA_PrkA RuvB_N AAA_3 AAA_18 AAA_2 TIP49 AAA_33 SKI AAA_17 nSTAND3 bpMoxR Sigma54_activat IstB_IS21
Other DBs
NCBI-ProteinID: AAY38974
UniProt: Q4ZPE8
Position
4691427..4693844
AA seq 805 aa
MSDQQTDSPDLPNDADEHDVSLSSDSTSLALPGQNLPDKVYIIPIHNRPFFPAQVLPVIV
NEEPWAETLELVSKSEHHSLALFFMDTPQEDPRHFKTDALPEYGTLVKVHHASRENGRLQ
FVAQGLSRVRIRTWLKHHRPPYLVEVEYPQQPNEPTDEVKAYGMALINAIKELLPLNPLY
SEELKNYLNRFSPNDPSPLTDFAAALTSATGVELQEVLDCVPMLRRMEKVLPMLRKEVEV
ARLQKEISAEVNRKIGEHQRQFFLKEQLKVIQQELGLSKDDRSADIEQFEQRLEGKTLPP
QARKKFDEEIGKLKVLETGSPEYAVTRNYLDWTSSLPWGVYGADKLDLKHARKVLDQHHA
GLDDIKARILEFLAVGAYKGEISGSIVLLVGPPGVGKTSVGRSIAESLGRPFYRLSVGGM
RDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDEIDKMGQSYQGDPASALLETLD
PEQNVEFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLLDRMEVIRLSGYITEEKLAIAKR
HLWPKQLAKAGVAKNKLSISDSALRAVIEGYAREAGVRHLEKQLGKLVRKAVVKLLDEPD
SVIKIGPKDLEASLGMPVFRSEQVLSGTGVITGLAWTSMGGATLPIEATRIHTLNRGFKL
TGQLGDVMKESAEIAYSYVSANLSKFGGDAKFFDEAFVHVHVPEGATPKDGPSAGVTMAS
ALLSLARNQPPKKGVAMTGELTLTGHVLPIGGVREKVIAARRQKIHELILPEPNRGNFEE
LPDYLKEGITVHFAKRFADVVKVLF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgagcgaccagcagacagactcgccagacttgcccaatgacgcagacgagcacgacgtg
tctctgagttccgacagcacctcgctggccttgcccggccagaacctgcccgacaaggtt
tacatcattccgatccacaaccgtccgttctttccggcgcaggtcctgcctgtcatcgtc
aatgaagagccgtgggccgaaacgctggagctggtcagcaagtccgagcaccattcgctg
gcgctgttcttcatggacactccgcaggaagatccacgccacttcaagactgacgcactc
cccgagtacggcactctggtcaaggttcaccacgccagtcgtgaaaatggtcgtttacag
ttcgtcgcgcagggcctcagccgggtgcgcatccgtacctggctcaagcatcatcgcccg
ccgtatctggtagaagtcgaatacccgcagcagcccaatgagccgaccgatgaagtgaag
gcctacggcatggccctgatcaacgcgatcaaggaactgctgccgctcaacccgctgtac
agcgaagagctgaagaattatctcaaccgtttcagccccaatgacccctcgccgctcacc
gactttgccgctgccctgacctcggccaccggtgtcgaattacaggaagtactcgactgt
gtgccgatgctcaggcgcatggagaaagtcctgccgatgctgcgcaaggaagtcgaggtt
gcacgcctgcagaaggaaatctctgccgaggtgaaccgcaagatcggcgagcatcagcgg
cagttcttcctcaaggaacagctcaaggtcattcagcaggagctgggcctgagcaaggac
gatcgcagcgccgacatcgaacagttcgagcagcgcctggaaggcaagaccctgccgcca
caggcgcgcaagaagttcgacgaagaaatcggcaagctcaaggtgctggaaaccggctcg
cccgaatacgccgtgacacgcaattacctggactggaccagctcgttgccatggggcgtc
tacggcgccgacaagctggatctcaagcacgcacgcaaggtgctcgatcagcaccatgcc
gggcttgacgatatcaaggcgcggattctcgaattccttgcggtgggtgcctacaagggc
gaaatcagcggctcgatcgtgctgctggtcggcccgccgggggtgggcaagaccagtgtc
gggcgctcgattgccgagtcgctggggcgaccgttctatcgcctgagcgtgggcggcatg
cgcgacgaggcggaaatcaagggccaccgccgtacctatatcggtgcgcaaccgggcaag
ctggtgcaggcgttgaaagacgttgaagtcatgaacccggtcatcatgctcgatgaaatc
gacaagatgggccagagctatcagggcgacccggcgtctgccctgctggaaaccctggac
ccggaacagaacgtcgagtttctcgatcactacctggacctgcgcctggacctctccaag
gtcctgttcgtgtgcacggccaacacgctggactcgatccccggcccgctgcttgaccgg
atggaagtgattcgcctgtccggctatatcaccgaagagaagctggcaatcgccaaacgc
cacttgtggcccaagcagttggcgaaagccggcgttgcgaaaaacaagctgagcatcagc
gacagcgcactgcgcgccgtcatcgagggttacgctcgcgaagccggtgtgcggcatctg
gagaaacagcttggcaagctggtgcgcaaagctgtcgtgaaactgctggacgagcccgat
tcagtgatcaagatcgggccgaaagacctcgaagcgtcgctgggcatgccggtgttccgc
agcgaacaggtgctgtccggcaccggcgtgatcaccggtctggcatggaccagtatgggc
ggcgctaccctgccgatcgaggcgacgcgcattcatacgctcaaccgcggcttcaagctg
accgggcaattgggcgatgtgatgaaggagtcggccgaaattgcctacagctacgtcagc
gccaatctgtcgaagtttggtggtgatgcgaagttcttcgatgaggcgttcgtgcacgta
cacgtccccgaaggtgccaccccgaaagacggcccgagtgcgggtgtgaccatggccagc
gccttgctgtccctggcccgcaaccagccgccgaaaaaaggcgtcgccatgaccggcgaa
ctgaccctgaccgggcatgtactgcccatcggcggcgtccgcgaaaaagtcattgccgcg
cggcgccagaagatccacgaactgatcctgccggagcctaaccgtggcaacttcgaagaa
ctgccggactatctcaaggaaggcattaccgtgcacttcgccaaacgcttcgccgacgtg
gtgaaggtgttgttctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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