KEGG T00246: Psyr

Pseudomonas syringae pv. syringae B728a: Psyr_4107

Entry

Psyr_4107 CDS T00246

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

psb Pseudomonas syringae pv. syringae B728a

Pathway

psb00300	Lysine biosynthesis
psb00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:psb00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:psb00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase DUF2209

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4896998..4898461)

AA seq 487 aa
MAFNLSKIFAHTDRDALIRELTLDSRNVRPGDLFLAVPGIKVDGRAHIADALKRGAAAVA
YEVAGSTVLPITDVPLIPVKGLAGQLSAIAGRFYGDPSRSLNLVGVTGTNGKTSVTQLVA
QALDVLGQRCGIVGTLGTGFYGSLQSGRHTTPDPIAVQATLTDLRKAGARAVAMEVSSHG
LDQGRATALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWSDLKCRVINLDDDFGRE
LAAVKQESRLITYSQLDSSAYLYCRDAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSNV
LAAVGALLGLDYALDEILKALPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAGVVERLADGVWVTDDNPRSESPVSIFDDIRPGF
VAADKVRFIEGRGQAIAELIASANADDVVVLAGKGHEDYQEINGQRQPFSDLQEAASALA
VWEPANA

NT seq 1464 nt +upstreamnt +downstreamnt
atggcctttaatctgagcaagattttcgctcacaccgaccgcgatgcgctgattcgcgag
ttgaccctcgacagccgcaatgtgcgcccgggcgacctgtttctggcagtgccgggcatc
aaggtcgatggccgcgcgcatatcgccgacgcgctcaagcgtggcgcagctgctgtagcc
tatgaagtcgcagggtcgaccgtgctgccgatcaccgacgtgccgctgatcccggtcaag
gggctcgccgggcagttgtccgccatcgccggtcgcttctatggcgatccgagccgcagt
ctgaatctggtcggtgttaccggcaccaacggcaagaccagcgtgacccaactggtggcc
caggcgcttgatgtcctcggccaacgttgcgggatcgtcggtaccttgggcaccggtttc
tacggctcgctgcaaagcggtcgccacaccacgcccgacccgattgccgtgcaggcgacg
ctgaccgacctgagaaaggccggtgcgcgcgcagtggcgatggaagtctcgtcccacggt
cttgatcagggacgcgctacggcgctggcctttgatgtggcggtgctgactaatctgtcc
cgtgaccatctggattatcacggcaccatggaggcctacgctgccgccaaggcgaagctg
ttcgcatggtccgatctgaaatgccgggtgatcaacctggatgacgacttcggtcgtgaa
ctggccgcggtcaaacaagagtcgcggttgatcacctacagccagctggacagttcggcc
tacctgtattgccgcgatgcgaagttcgatgacgatggcgtgcgtgccacgctggtcacg
ccgcagggcgagcatttcctgcgcagcagcctgctgggtcgtttcaatctgagcaatgtg
ctggctgcggtcggcgcgctgctgggcctggattacgcgctggacgaaattctcaaggcg
ctgccgaaactcgaaggcccggtcggacgcatgcagcgtctgggtggtgccgacaagcct
ctggtggtcgtggattacgcgcacaccccggacgcgctggaaaaagtactcgaagcactg
cgcccgcacgccaagggccgcttgttgtgcctgttcggctgcggcggtgatcgtgaccgt
ggcaagcgtccgttgatggctggagtggtcgagcgtctggccgacggcgtatgggtcact
gatgacaatccgcgctccgaatcgcctgtcagtatttttgacgatatacgccctggcttc
gttgctgcggacaaggtgcgtttcatcgaaggtcgcggtcaggccattgccgagctgatt
gccagcgccaatgctgatgacgtggtggtgcttgctggcaagggccacgaggactaccag
gaaatcaacggtcagcggcagccgttctccgatttgcaagaagccgccagtgcgcttgcc
gtatgggagcctgcgaatgcttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PSB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system