KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_4761Help
Entry
Psyr_4761         CDS       T00246                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psyr_4761
Enzymes [BR:psb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psyr_4761
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psyr_4761
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5636162..5636974)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL
LIQAEVGTLISHLGMSGNLRLVEAGLPALKHEHVDIELESGLALRYTDPRRFGAMLWSLD
PHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAA
GIDPRREAGSVSRARYLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGR
GGQPCKVCGTTLREVKLGQRASVYCPKCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagtcgaaaccacccgtcgtggcattgcgccgcatcttgaaggt
cagcgcgtcagccgcgtgatcgtgcgcgacagccgcttgcgctggcccattcccgaagac
ctggacgtgcgcctgtccggccagcgcatcgtgcaggtggacaggcgcgccaagtacctg
ctgatccaggccgaggtgggcaccctgatcagccacctgggcatgtccggcaatctgcgt
ctggtcgaggccgggctcccggcgctcaaacatgagcatgtcgatatcgaactggagtcc
gggctggccttgcgttacaccgacccgcgtcgctttggcgcgatgctctggagccttgat
ccgcataatcacgaactgttgatccgcctggggccggagccgctgaccgatctgttcgat
ggcgagcgtctttacgagcgttcgcgtggcaagtcgatcgctgtcaagccgttcgtcatg
gacaacgccgttgtggtcggggtgggcaatatctatgcgaccgaagcgctgttcgccgcg
ggcatcgacccgcgccgcgaagcagggagtgtgtcccgggcgcgttacctgaagctggcc
atcgagatcaaacgcattctggcctacgcgatagagcgtggcggcaccaccctgcgtgac
ttcatcggcggtgacggcaagcccgggtatttccagcaggaattgtttgcatatgggcgt
ggcggtcagccatgcaaggtgtgcggcacgacgctgcgtgaggtcaaactcggccagcgc
gccagcgtgtattgcccgaaatgccagcgctga

DBGET integrated database retrieval system