KEGG   Pseudoxanthomonas spadix: DSC_01360Help
Entry
DSC_01360         CDS       T01643                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psd  Pseudoxanthomonas spadix
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    DSC_01360
Enzymes [BR:psd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     DSC_01360
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DSC_01360
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
84005..84817
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGLAPHLEGVIVRAVLQRRDDLRWPIPDQIRAHLPGARIEAVRRRAKYL
LLDTLAGSALLHLGMSGSLRVLPAATPVKAHDHVDLALDGGRVLRFNDPRRFGSLLWQAP
GTTHPLLQGLGPEPLSEEFDGAWLFARSRGRSAPVKSFLMDQRIVVGVGNIYAAESLFRA
RIHPLRAAGRVSRERYEALAMAVKDILAHAIQRGGTTLRDFISPDGVPGYFEQELWVYGR
GGLPCKRCAAALKQAQVGQRTTVWCPHCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgaaaccacccgccgcggcctggccccgcacctggaaggg
gtgatcgtgcgcgcagtcctgcagcgccgcgacgacctgcgctggccgatccccgaccag
atccgcgcgcacctgcccggggcgcggatcgaggcggtgcgtcgccgcgccaagtacctg
ctgctggacaccctggccggcagcgcgctgctgcacctgggcatgagcggcagcctgcgg
gtgctgccggcggccacgccggtgaaggcgcacgaccatgtcgacctggccctggatggc
gggcgggtgctgcgcttcaacgatccgcgccgcttcggcagcctgctgtggcaggcgccg
ggcaccacccacccgctgctgcaggggctgggaccggagccgctgtcggaggagttcgat
ggtgcatggctgtttgcacgcagccgcggccgcagcgccccggtcaagagcttcctgatg
gaccagcggatcgtggtcggggtgggcaacatctacgcggccgaaagcctgttcagggcc
aggatccacccgctgcgcgcggccggcagggtctcccgcgaacgctatgaagccctggcg
atggcggtaaaggacatcctggcccacgccatccagcgcgggggcaccaccttgcgcgat
ttcatcagccccgatggcgtgccgggctatttcgagcaggaactgtgggtctacggccgc
ggcggcctgccctgcaagcggtgcgcggccgccctgaagcaagcccaggtcggccagcgc
accacggtctggtgcccgcactgccagcgctga

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