KEGG T01643: DSC

Pseudoxanthomonas spadix: DSC_15135

Entry

DSC_15135 CDS T01643

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

psd Pseudoxanthomonas spadix

Pathway

psd03410	Base excision repair
psd03420	Nucleotide excision repair
psd03430	Mismatch repair
psd03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:psd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:psd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:psd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:psd03450]

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

357418692

NCBI-GeneID:

11373728

UniProt:

G7UW13

Position

complement(3091430..3092299)

AA seq 289 aa
MRVMLLSLLLSLLLNCLLLGVPAHAEPPRLMLATGYHGHLALADYLVSEKLDGVRGRWDG
QALWTRGGARIDAPAWFTRGWPTQPLDGELWLGRGRFDAASALVRAGNADDPAWHDLHFM
LFDLPADAGPFEARVARMQALVKASGNAQLRLVEQRRIDNVAALDAQFARVVAAGGEGLM
LHRRDAHYLVGRSDALLKYKPYDDAEARVVAHLGGKGKYAGLLGALLVQLPDGRSFRIGS
GFTDAQRAAPPPLGAWVTYRYNGLTSKGLPRFARFLHVRDEPPPPDPQR

NT seq 870 nt +upstreamnt +downstreamnt
atgcgcgtcatgttgctgtcgctgttgctgtcgctgttgctgaactgtctgctgctgggc
gtgccggcgcatgccgagccgccgcgcctgatgctggccaccgggtaccacggccacttg
gcgctcgccgattacctggtcagcgaaaagctcgatggcgtgcgcggccgttgggatggc
caggcgctgtggacgcgtgggggcgcacggatcgacgcgccggcctggttcacccgcggc
tggccgacgcagccgctggatggcgagctgtggctcgggcgtggccggttcgatgcggcc
agcgcgctggtccgcgcaggcaacgcggacgatccggcatggcatgacctgcacttcatg
ctgttcgacctgccggccgatgccgggccgttcgaagcgcgcgtggcgcggatgcaggcg
ctggtcaaggccagcggcaatgcgcagctgcgcttggtggagcagcgccggatcgacaat
gtcgccgcactggatgcgcagttcgcccgggtcgtggccgctggtggcgaaggcctgatg
cttcaccggcgtgatgcgcattacttggtcgggcgcagcgatgcgctgctcaagtacaag
ccctacgacgatgccgaggcgcgggtggtcgcccacctcggcggcaagggcaagtatgca
ggcctgcttggcgcgctgctggtgcagctgccggatgggcgaagcttccgtatcggcagc
ggcttcaccgatgcccagcgcgccgcgccgccgccgctgggcgcctgggtgacctatcgc
tacaacgggctgaccagcaagggcctgccgcgctttgcccgcttcctgcatgtgcgcgac
gaaccaccgccacccgatccgcagcgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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