KEGG   Pseudonocardia sp. HH130629-09: XF36_15620
Entry
XF36_15620        CDS       T04082                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pseh  Pseudonocardia sp. HH130629-09
Pathway
pseh03030  DNA replication
pseh03430  Mismatch repair
pseh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pseh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XF36_15620
   03430 Mismatch repair
    XF36_15620
   03440 Homologous recombination
    XF36_15620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pseh03032]
    XF36_15620
   03400 DNA repair and recombination proteins [BR:pseh03400]
    XF36_15620
Enzymes [BR:pseh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     XF36_15620
DNA replication proteins [BR:pseh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     XF36_15620
DNA repair and recombination proteins [BR:pseh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     XF36_15620
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: ALE84400
UniProt: A0A0M5LU10
Position
complement(3411070..3414618)
AA seq 1182 aa
MGSAGSGNRSFVHLHTHTEFSMLDGAARLDDLFSEAAKHEMPAIAMTDHGNVYGAFEFWR
KAKAHDVKPIIGMEGYLAPGSRHERKRTALGNGSENNPDLMYTHMTLLAENTEGMHNLFR
LSSLASLEGYYYKPRMDRELLEKYGKGLIATTGCPSGEVARLLQQHDFAAACQAASDYRD
IFGKDNFFLELMDHGIEIEKRVQEDLFRLKDKLDLPGLATNDLHYTYPDDTKAHEVLLCV
QTGKTLADPNRFKFDAQDFYLKSAAEMRQLWDPIHPEACDNTLLVAERCNIDFTTGQDLQ
PKAPVPEGETEESWLIKEVERGLHMRFPDGVTERYRQQANYEVGVIIKMGYPGYFLVTAD
LIQHAKSVGIRCGPGRGSAAGSLVAYVLGITDLDPIRHKLIFERFLNPDRVSMPDIDMDF
DERRRGEMIRYVTEKYGEDRIAQIITYSTIKAKAAIKDSARVLFGQPGYSVADRISKAMP
PAVMGKDIPLSGIFDPSHKRYSEATEVRALYEVDPQVKEIVDTARGLEGLKRQWGVHAAG
VIMSSTPLIDVIPIQRRESDGAIITQFDMGVCETIGLLKMDFLGLRNLTILDDALENIEL
NGKPAVDLDKVELDDRKTYELLSRGDTLGVFQLDGGPMRDLLRRMAPSEFEHISAVGALY
RPGPMGANAHNDYADRKNGRQEITPIHPELAEPLKDVLGETFGLIVYQEQVMSIAQVLAG
YTLGQADLLRRAMGKKKKEILDKEYAGFAQGMKDNGYSAAAVKTLWDILLPFSDYAFNRA
HSAAYGVVSYWTAYLKANYPAEYMAGVLTSVRDDKDKAAVYLAECRRMGITVLPPDVNDS
VRNFAPVGDDIRFGLGGIRNVGHNVVDAIVAARREKGNFVDFSDFLRKVDAVVCNKKVVE
SLIKAGAFDSLGHSRKGLLLVHADAIDAVMSTKKAASMGQFDLFGSLDGPGEGDDGGLGG
IFDVKVPDEEWDSKHKLAVEREMLGLYVSGHPLQGLEQALAAKSDTSIADIVEGSVAEGA
QVTVGGILANVNRRVNKNGEPWASAQIEDLAGGIEVLFFPRAYQVVGVDVAEDAIVLVKG
RVNKRDDRVSLIANDLAVPELATGEAGLPIRVSLRTDQCTPERVAKLKEVLTHHPGTSEV
HLTLVYGSKMTALRLDDSLKVTHTSALMGDLKALLGPGCLGG
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgggcagtgccggatccgggaatcgctccttcgtccatctgcacacgcacaccgagttc
tcgatgctcgacggggccgcgcggctcgacgacctgttctccgaggccgccaagcacgag
atgccggccatcgcgatgaccgaccacggcaacgtgtacggcgccttcgagttctggcgc
aaggcgaaggcgcacgacgtcaagccgatcatcggcatggagggctacctcgcgcccggg
tcgcgccacgagcgcaagcgcaccgcgctgggcaacggcagcgagaacaaccccgacctc
atgtacacccacatgacgctgctcgcggagaacacggaggggatgcacaacctcttccgg
ctctcctcgctggccagcctcgaggggtactactacaagccgcgtatggaccgcgagctg
ctcgagaagtacggcaagggcctgatcgcgacgacgggctgcccgtccggcgaggtcgcc
cggctgctccagcagcacgacttcgccgccgcctgccaggccgcgagcgactaccgcgac
atcttcgggaaggacaacttcttcctggagctgatggatcacggcatcgagatcgagaag
cgggtccaggaggacctgttccgcctcaaggacaagctcgacctgcccggtctcgcgacg
aacgacctgcactacacctatcccgacgacaccaaggcgcacgaggtgctgctgtgcgtc
cagaccggcaagaccctcgctgacccgaaccggttcaagttcgatgcgcaggacttctac
ctcaagtccgccgccgagatgcgccagctgtgggacccgatccaccccgaggcctgtgac
aacacgctgctcgtcgccgagcgctgcaacatcgacttcaccaccggccaggacctccag
cccaaggcccccgtcccggagggggagaccgaggagtcctggctgatcaaggaggtcgag
cggggactgcacatgcggttccccgacggcgtcaccgagcgctaccgccagcaggccaac
tacgaggtcggcgtcatcatcaagatgggctaccccggctacttcctggtgaccgcggac
ctcatccagcacgccaagtcggtcggcatccggtgcggccccggccgaggctcggcggcg
ggctcgctggtcgcctacgtcctgggcatcaccgacctcgacccgatccggcacaagctg
atcttcgagcggttcctcaaccccgaccgtgtctcgatgcccgacatcgacatggacttc
gacgagcgccgccgcggcgagatgatccgctacgtcaccgagaagtacggcgaggaccgg
atcgcccagatcatcacctactccacgatcaaggcgaaggccgcgatcaaggactcggcg
cgggtgctcttcggccagcccggctactcggtcgccgaccgcatctccaaggcgatgccg
cccgcggtgatgggcaaggacatcccgctgtcgggcatcttcgacccgtcgcacaagcgg
tactccgaggcgaccgaggtccgcgccctctacgaggtcgacccgcaggtcaaggagatc
gtcgacaccgcgcggggcctggagggcctcaagcgccagtggggtgtgcacgccgcaggc
gtgatcatgtcctcgacgccgctgatcgacgtgatcccgatccagcgccgcgagtccgac
ggcgcgatcatcacccagttcgacatgggcgtctgcgagaccatcggtctgctgaagatg
gacttcctggggctgcgcaacctcaccatcctcgacgacgccctggagaacatcgagctc
aacggcaagcccgccgtcgacctggacaaggtcgagctcgacgaccgcaagacctacgag
ctgctctcccgcggtgacaccctgggggtgttccagctcgacggtggtccgatgcgggac
ctgctgcgccgcatggcgcccagcgagttcgagcacatctccgcggtcggcgcgctgtac
cgcccgggcccgatgggtgcgaacgcgcacaacgactacgccgaccgcaagaacggccgg
caggagatcacgccgatccacccggagctggccgagccgctcaaggacgtcctcggtgag
accttcggcctgatcgtgtaccaggaacaggtcatgtccatcgcgcaggtgctggcgggc
tacacgctcggccaggcggacctgctccgccgcgcgatgggcaagaagaagaaggagatc
ctggacaaggagtacgccggcttcgcccagggcatgaaggacaacggctactccgcggcc
gcggtcaagacgctctgggacatcctgctcccgttctccgactacgccttcaaccgtgcc
cactccgccgcctacggggtggtgtcctactggacggcctacctcaaggcgaactacccg
gccgagtacatggccggcgtgctcacctcggtgcgcgacgacaaggacaaggccgcggtc
tacctggcggagtgccgccggatgggcatcacggtcctcccgccggacgtcaacgactcg
gtgcgcaacttcgccccggtcggcgacgacatccgcttcggcctcggcggcatccgcaac
gtcgggcacaacgtcgtcgacgcgatcgtcgccgcacgacgggagaaggggaacttcgtc
gacttctccgacttcctgcgcaaggtcgacgcggtcgtctgcaacaagaaggtcgtcgag
tcgctgatcaaggcgggagccttcgactcgctcgggcactcccgcaagggcctgctgctc
gtgcacgccgacgccatcgacgcggtgatgagcaccaagaaggccgcctcgatgggccag
ttcgacctgttcgggtccctggacggccccggcgagggcgacgacggcggcctcggtggc
atcttcgacgtgaaggtgcccgacgaggagtgggactccaagcacaagctcgccgttgag
cgggagatgctcggcctctacgtgtccgggcacccgctgcagggtctcgagcaggcgctc
gccgcgaagtccgacacctcgatcgccgacatcgtcgagggctcggtcgccgagggcgcg
caggtcaccgtcggcggcatccttgccaacgtcaaccgccgggtgaacaagaacggcgag
ccctgggcctcggcgcagatcgaggacctcgccggtggcatcgaggtgctgttcttcccg
cgggcctaccaggtggtgggcgtcgacgtcgccgaggacgcgatcgtgctggtcaagggg
cgggtcaacaagcgcgacgaccgcgtctcgctgatcgcgaacgacctcgcggtgcccgag
ctcgccaccggtgaggccgggctgccgattcgggtcagcctgcgcaccgaccagtgcacg
cccgagcgcgtggccaagctcaaggaggtgctgacccaccaccccggcacctccgaggtg
cacctgacgctggtctacggcagcaagatgaccgccctgcggctggacgactcgctcaag
gtcacgcacacctcggccctgatgggggacctgaaggccctgctcggccccggctgcctc
ggcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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