KEGG   Pseudomonas sp. StFLB209: PSCI_5041
Entry
PSCI_5041         CDS       T03623                                 
Name
(GenBank) clpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
pses  Pseudomonas sp. StFLB209
Pathway
pses02025  Biofilm formation - Pseudomonas aeruginosa
pses03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pses00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSCI_5041
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSCI_5041
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pses02044]
    PSCI_5041
Secretion system [BR:pses02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSCI_5041
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 AAA_16 ClpB_D2-small NACHT TniB nSTAND3 AAA_7 bpMoxR AAA_18 Sigma54_activat RsgA_GTPase Clp_N ABC_tran RuvB_N Mg_chelatase AAA_33 SLFN-g3_helicase Rad17 AAA_25
Other DBs
NCBI-ProteinID: BAP45743
UniProt: A0A077LRC4
Position
complement(5681650..5684214)
AA seq 854 aa
MINLDLQKLIQAVDAPTRADLQTCAERCVSRGASQLLVDDLLLCLLERPQGLLERGLRDA
GVDAGRLQAVLQPRPGQSTSRHPTFAPELVQWLQQALLVANLDLGRACIDQAALLLALLG
NPLAHAGQGYQPLLASLNLERLKAAAQADSQHAVLAASSEALLPRFTHDLTGQALEGRLD
PVLCRDAEISQLIDILLRRRKNNPIVVGEAGVGKSALIEGLALRISAGEVPPALQGVRVL
ALDLGLLQAGASIKGEFERRLQGVIEEARAATPAVIIFIDEAHTLIGAGNQAGSSDAANL
LKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQVHEPSVAEALTILRGLAPAYE
HSHGVYIRDDALVAAAELSARYLAGRQLPDKAVDVLDTACARARISLVAAPAELERLRDE
HAQQLRQLQALRRDQDAGLTVAAQAMARLQDRLVHTEQQLPALEADWHRQRELAERLPEL
RQQLSEVRAAGQDDGVALSELLQTRAALADAHAQQRLASCEVCPRLVAQVISAWTGVPVE
QLAREHNARVAGFAQDLQARIRGQDQAVQILDQAVRTVAAGLNRPDAPVGVFLLVGPSGV
GKTETARVLAQLLYGGEGFLTTLNMSEFQEKHSVARLIGAPPGYIGYGEGGMLTEAVRRR
PYSVVLLDEVEKADPDVLNLFYQIFDKGIANDGEGREIDFRNTLILLTSNLASEQIEALC
AEGARPGPGLLVEQIRPALSRHFKPALLARMRVVPYYPVGTAVLGELVGLKLQQLGQRLR
QRQLEFSYSPELVVQLAQRCQQDPSGARLIDPLFDQQLMPVLVDRLLAAMASGEPLERAH
AGLASDGHVAWEFS
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgatcaacctggacctgcaaaaactcattcaggcagtcgatgccccaacccgcgccgac
ctgcaaacctgcgccgagcgctgtgtcagccgtggcgccagtcagttgttggtcgacgac
ctgctgttgtgtctgcttgagcgcccacagggcctgcttgagcgcggtttgcgcgatgcc
ggtgtcgacgctggccggttgcaggctgtgctgcaaccgcgcccaggccagagcacctcg
cgccatccgacgtttgccccggagctggtgcaatggctgcagcaagcgctgttggtggcc
aatctggatctgggccgggcctgcatcgaccaggcggcactgttactggcgctgctgggc
aacccgctggcgcacgccggtcagggctatcagccattgctggcgtcactcaatctcgaa
cgactcaaggcggccgcgcaagccgacagccagcacgctgtgctggcggccagtagcgaa
gcactgttaccgcgctttacccatgatctaaccggtcaggcattggagggccgacttgac
ccggtgctgtgccgggatgccgaaatcagtcagttgatcgacattctgctgcggcggcgc
aagaacaatccgattgtggtcggtgaggctggcgtcggtaaaagcgccttgatcgaaggc
ctggcgctacgcatcagcgccggtgaagtgccgccggcgctgcaaggcgttcgcgtgctg
gcgctggatctggggctgttgcaggccggggcgagcatcaagggcgagttcgagcggcgc
ttgcagggcgtgatcgaggaggcccgcgcagccactccagcggtgatcatattcattgac
gaagcccacaccctgatcggtgccggtaaccaggccggaagcagcgatgccgccaacctg
ctcaaaccggccctggcccgcggtgagctgcgtaccattgcggccaccacctggtcggaa
tacaaaaaatacttcgagaaagacccggccctggccagacgctttcagcctgtgcaggtg
cacgaacccagcgtggctgaggcgttgacgatcctgcgtgggctggcgcctgcctatgaa
cacagccacggtgtttacatccgcgacgatgcgctggtggccgctgccgaactttcagca
cgttacctggcaggccgacaactgccggacaaagccgtggatgtgctggacaccgcctgt
gccagagctcgcatcagtctggtcgcggcgccagcggagctggagcggctacgtgatgag
catgcccaacaactgcgccaacttcaggcgctgcgccgcgatcaggacgccggactcacc
gtggcggcgcaggccatggcccggctgcaagaccggttggtgcataccgaacaacagctc
ccggcgctggaagccgactggcatcggcagcgcgagttggccgagcgcttgcctgagctg
cgtcagcaactcagtgaggtccgagcggccggccaggatgacggcgtggcactgagtgag
ctgctgcaaacccgcgcagccctggccgacgcccatgcgcagcagcgtctggccagttgt
gaagtttgcccacggctggtcgcgcaagtgatcagtgcctggaccggtgtgccggtagaa
caactggctcgcgaacacaatgcgcgggtcgcaggctttgcccaagacttgcaggcgcgg
atcagaggccaggaccaggcggtacagatccttgatcaagcagtgcgtacggttgctgcc
gggctcaatcgccccgatgcgccggtaggggtatttctgttggtcggccccagcggcgtg
ggcaagaccgagacggcgcgagtgctggcccaattgctgtatggcggtgagggttttctg
accacgctgaacatgtcggagtttcaggaaaagcacagcgtggcccggctgatcggtgca
ccgccgggctacatcggctatggcgagggcggcatgctcaccgaggcggtacgccggcgg
ccctattcggtggtgctgctcgacgaagtcgaaaaggccgatccggatgtgctcaacctg
ttttaccagatcttcgataaaggcattgccaacgatggcgagggccgcgagatcgacttt
cgcaacaccttgatcctgctgacctccaaccttgccagcgagcaaatcgaagcgctgtgt
gccgagggtgcgcgtcccgggccagggttattggtcgagcagattcgccccgcgcttagt
cgccatttcaagccggcgttgctggcgcggatgcgtgtggtgccttactacccggtggga
accgccgtgctgggcgaactggtcggcctgaagctgcaacagctggggcaacgcctgcgc
cagcgtcagctggagttcagctacagccctgaattggtcgtgcaactggcgcagcgctgc
cagcaggatcccagtggcgcgcggctgatcgaccctctgttcgaccagcaactgatgccg
gttctggtcgatcgcctgctggccgccatggccagtggcgaaccccttgagcgggcccat
gccggtctcgccagcgatggtcatgtggcttgggagttctcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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