KEGG   Pseudomonas sp. TCU-HL1: THL1_901
Entry
THL1_901          CDS       T05373                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset03030  DNA replication
pset03430  Mismatch repair
pset03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pset00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THL1_901
   03430 Mismatch repair
    THL1_901
   03440 Homologous recombination
    THL1_901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pset03032]
    THL1_901
   03400 DNA repair and recombination proteins [BR:pset03400]
    THL1_901
Enzymes [BR:pset01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THL1_901
DNA replication proteins [BR:pset03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     THL1_901
DNA repair and recombination proteins [BR:pset03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     THL1_901
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AOE83449
UniProt: A0A1B3E1N7
Position
972372..972983
AA seq 203 aa
MDPIAVIDFETTGVMPGPACRATEIGIVILEGGRIVDRYQSLMNAGIPVPSFIQGLTGIT
TAMLRDAPPVAQVMGEAADFIGDLPLLAHNASFDQKFWDFELARIGRSRRQPFACSLLLA
RRLLPEAPSHKLGNLDTWACLPNTGKAHRALADAEMAANLTRHLAGCLRDKHGIGEVSHK
LFCSLQKVPAAKIPEALRRHREG
NT seq 612 nt   +upstreamnt  +downstreamnt
gtggaccccatagctgtcattgacttcgaaactaccggcgtcatgcccggacccgcttgc
cgcgccaccgagattggcatcgtcatcctggagggcgggcgcatcgtcgaccgctaccag
agcctgatgaacgccggcatcccggtgccctccttcatccagggcctcaccgggatcacc
accgccatgctgcgtgacgcgccgccggtggcgcaggtgatgggcgaggccgccgacttc
attggtgacctgccgctgctggcgcacaacgcgtccttcgaccagaagttctgggatttc
gaactggcccgcatcgggcgctcccgtcgccagccgttcgcctgctcgctgctgctcgcc
cggcgcctactgccggaggcgcccagccacaagctcggcaacctcgacacgtgggcgtgc
ctgcccaacaccggcaaggcccaccgcgccctggccgacgccgagatggccgccaacctc
acccggcacctggctggctgcctgcgtgacaagcacgggatcggcgaggtatcgcacaag
ctcttctgcagcctgcagaaggtcccggcggcgaagattcccgaagcgctcaggcggcat
cgggagggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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