KEGG   Pseudanabaena sp. PCC 7367: Pse7367_2360
Entry
Pse7367_2360      CDS       T02369                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
pseu  Pseudanabaena sp. PCC 7367
Pathway
pseu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pseu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pse7367_2360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pseu03019]
    Pse7367_2360
   03400 DNA repair and recombination proteins [BR:pseu03400]
    Pse7367_2360
Enzymes [BR:pseu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pse7367_2360
Messenger RNA biogenesis [BR:pseu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Pse7367_2360
DNA repair and recombination proteins [BR:pseu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Pse7367_2360
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind SecA_DEAD DUF2000 Myb_DNA-bind_2
Other DBs
NCBI-ProteinID: AFY70621
UniProt: K9SKW9
Position
2976884..2978746
AA seq 620 aa
MQIWRDERASVTDHSWQSINQKLKQIWDYDRLYPAQSQVIESMLQGRDTIAVMPTGSGKS
LCFQLPALIQDGLTIVISPLIALMTEQVKDLQTRGIAAATINSSLSKNQRYQVLRNLPNL
KLLYVSPETLLSAKIWQRLCKPDIHIANLIIDEAHCLVQWGSSFRPTYRRLGVVRAALAK
YQPEQSKENRKITIAAFTATADRFTQAEIVKCLELNNPHVININPYRSNLSLNVAIAWTP
LCRKQMALRFINQQRDQNGNLSAGLVYVRTRRGAELLTEWLLDNLCTDLTKLNQTASIAA
YHAGLPPIERNQIEQNWLAGACPIVVCTSAFGLGINNQQMRWVLHFQPPLTLSEYVQEIG
RAGRDGDPAAALLLISEPTGILDPSDRQLHNFFNQQQQNQQTQALALVQQIPPGGNYEQV
SRKMAKDNRKQGDRLALGLAILHSMDKLVWHDPHHYELVETVHNSSTIINRDVELNHDLT
RSHKDPWRSQRMVLPLVNRLQSMVVIIARRAINKVQNPDRDQSAQLDSYGRAIAQMQTYI
NDRGCRWRFILEAFSPGEDDLAPTSHSQVGELIAISNLNSVLMPKSSLPQLENGDLTHFK
CGHCDRCRQDANLTARASKF
NT seq 1863 nt   +upstreamnt  +downstreamnt
gtgcagatatggcgagacgaaagagcaagtgtgaccgatcattcctggcagtcaattaat
caaaagctcaaacaaatctgggattacgatcgcctctatcctgcccagtcccaggtaatc
gagagcatgttgcaaggccgcgacacgatcgcagttatgcccactggcagcggtaaatca
ttgtgttttcaactgcctgcgctaattcaagacggtctcacgatcgtgatctcgccattg
atcgccttgatgaccgagcaagttaaagatctgcaaaccagggggatcgcagccgccacg
atcaacagcagccttagtaaaaatcagcgatatcaagtcctacgcaacttaccaaaccta
aaactactctacgtctcacccgaaaccctgctctcagccaaaatatggcaacggttatgt
aagccagatattcacattgccaatctgattatcgacgaagcccattgtctggtgcagtgg
ggtagctcgtttcggcctacctatcgccgtcttggcgtagtgcgtgcggctttagcaaaa
tatcaacctgaacagagcaaagagaataggaaaattacgatcgctgctttcacggccacc
gccgatcgcttcacccaggccgagatcgttaaatgtttagagctaaacaatccccatgta
ataaatatcaacccttatcgatcgaatttaagcttgaacgtggcgatcgcctggactccc
ctttgccgcaagcagatggccttaaggttcatcaaccagcagcgcgatcaaaacgggaat
ctctctgctggtctggtgtatgtgcgtacccgccgtggtgcggagttactgactgaatgg
ttattagacaatttatgcaccgatctgactaagctgaatcaaactgcgtcgatcgctgcc
tatcatgctggcttgccaccaattgagcgtaatcaaatcgaacaaaactggctagctgga
gcttgcccgatcgtggtttgtacctccgcttttggtctgggaattaataaccaacagatg
cgctgggtattgcattttcaaccacccttaactctatctgagtatgtacaggaaattggt
cgtgctggtcgggatggcgatccggctgcggctcttttgctgatcagtgagccgacggga
attttagaccctagcgatcggcaactccataactttttcaatcaacagcagcaaaatcaa
caaactcaagccctggccttagttcagcaaatcccccctggtggtaattatgagcaggtg
tctcgcaagatggctaaagacaatcgcaagcagggcgatcgcttggcgctggggttagct
attctacatagtatggacaagctggtttggcacgatccacatcattatgaactggttgaa
acggttcataactcttcaacgatcattaaccgcgatgtagagcttaatcacgatctcacc
agatctcataaagatccttggcgatcgcagcgtatggttttgcccttggtcaatcgcttg
caaagcatggttgtaatcattgccaggagagcaatcaacaaagttcaaaatcccgatcgg
gatcaatctgcccagctagatagttatggcagggcgatcgcccaaatgcagacttatata
aacgatcgcggctgtcgatggcgatttattctagaagcatttagcccaggtgaagatgac
cttgcccctacttcccatagtcaagttggtgagctaattgcaattagtaatctcaactca
gttttgatgcctaaatcatcactacctcagttagaaaatggcgatctgactcactttaaa
tgtggacattgcgatcgttgtcgccaggatgccaatctgaccgcaagagcttctaaattt
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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