KEGG   Pseudomonas stutzeri RCH2: Psest_0239Help
Entry
Psest_0239        CDS       T02391                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psh  Pseudomonas stutzeri RCH2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psest_0239
Enzymes [BR:psh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psest_0239
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psest_0239
DNA repair and recombination proteins [BR:psh03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Psest_0239
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
249688..250500
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIEPHLLGQRVDRVLVRDRRLRWPVPEDLDVRLSGQRIDAVERRAKYL
LIKAETGTLIVHLGMSGSLRLVDAAQPVGKHDHVDILLESGQALRYTDPRRFGAMLWSEE
PLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEVRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
AGEFCKSCGSTLREIRLGQRASVYCSRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactcccagaagttgaaactacccgtcgtggcatcgagccgcacctgctcggt
cagcgcgtcgaccgcgtgctggtgcgcgaccggcgcctgcgctggccggttccggaggac
cttgatgtgcgcctgtccggccagcgtatcgatgccgtcgagcggcgcgccaagtacctg
ctgatcaaggccgaaaccggcacattgatcgtccatctgggtatgtcaggcagcctgcgc
ctggtggacgcggcgcagccggtgggcaagcacgatcacgtcgatattctgctggagtcc
ggccaggcactgcgctacaccgacccgcggcgtttcggcgcgatgctctggagcgaggag
cctctcgcccatgtgctgctggcgagcctcggacccgagccgctgggtgaggatttcgac
ggcgaccggctgtatcggctgtcccgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgccgtggtggtgggcgtcggcaatatctatgcgagcgaggcgctgttcgccgcc
ggcatcgacccgcggcgcccggcaggaagcatctcgcgagcgcgttacctgaaactgggc
gaggaagtccgacggatactggcgatggccatcgagcgcggcggcacgaccctgcgcgac
ttcgtcggcggcgacggcaagcccggttacttccagcaggagctgttcgtctacggacgg
gccggcgaattctgcaagagctgcggctcgaccctgcgcgagattcgtctcggtcagcgc
gccagtgtctattgcagccgttgccagcgttga

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