KEGG   Plesiomonas shigelloides: SAMEA2665130_1488
Entry
SAMEA2665130_1488 CDS       T04378                                 
Symbol
rlmF
Name
(GenBank) Ribosomal RNA large subunit methyltransferase F
  KO
K06970  23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
Organism
pshi  Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:pshi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pshi03009]
    SAMEA2665130_1488 (rlmF)
Enzymes [BR:pshi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.181  23S rRNA (adenine1618-N6)-methyltransferase
     SAMEA2665130_1488 (rlmF)
Ribosome biogenesis [BR:pshi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SAMEA2665130_1488 (rlmF)
SSDB
Motif
Pfam: Methyltransf_10 MTS Methyltransf_12 Methyltransf_25
Other DBs
NCBI-ProteinID: SBT61010
Position
1:complement(1671627..1672607)
AA seq 326 aa
MSDTKSNLHPRNLHRSSYDFAALTEASPELANYVQRNAYGTDSINFSDPNAVKALNRALL
KHFYAVEGWDVPEGYLCPPVPGRADYVHHLADLLAEANQGRIPKGKRITGLDVGTGANLI
YPLLAHHSYGWNMVGSEIDTVAIASAEAILERNPAMQSAITLRTQTQPSDILRGIIQPGE
MFDFTLCNPPFHASAQEAAETTQRKRSKLAYNQVSRGNANTIDAQPALNFGGQHNELWCD
GGEVRFISDMIHESREFAGQCFWFTSLVSKKTSLPALYEALSAVGATEVKTIEMSQGQKI
SRFIAWTFFTPAQQKAWRMYRWNARG
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagtgacaccaaatctaatctgcacccacgtaacctgcaccgctcttcgtatgacttc
gcggcgctgaccgaagcaagcccagagctggccaactatgtccagcgcaacgcctatggc
accgattccatcaatttctctgatccaaatgcagtgaaagccctgaaccgggcgttgctg
aagcatttttatgcagttgaaggctgggatgttcctgaaggctacctctgcccaccggtt
ccggggcgtgccgattatgttcaccatctggctgatctgctggccgaagccaatcaaggt
cgaattccgaaaggtaaacgcattaccggtttggatgtcggtactggcgcgaacctgatt
tatccgctgctggcccatcacagctatggctggaatatggtcggttcggagattgatact
gtcgccatcgcgtctgctgaggctattttagagcgcaacccagccatgcaatcagcgatt
acgctgcgtacccaaactcagcctagcgacattttgcgtggcattattcagccgggcgaa
atgtttgacttcaccctgtgcaacccgccattccatgcctctgcgcaggaagcggcagaa
acgacccagcgtaagcgcagcaagttggcctacaatcaagtctcgcgcggtaatgccaat
accattgatgcccagccggctctcaatttcggcggtcagcataatgagctgtggtgcgat
ggcggcgaagtgcgtttcatcagtgatatgatccacgaaagccgcgaatttgccggtcag
tgtttctggtttacgtcattggtatcgaaaaagaccagtttgccagcgctgtatgaagcc
ttgagcgcagtgggcgcgaccgaagtgaaaactatcgaaatgtcacaagggcagaaaatc
agccgctttatcgcctggaccttcttcaccccagcccagcaaaaagcgtggcgcatgtat
cgttggaatgctcgcggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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