KEGG   Providencia stuartii MRSN 2154: S70_11820
Entry
S70_11820         CDS       T02042                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
psi  Providencia stuartii MRSN 2154
Pathway
psi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    S70_11820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psi03019]
    S70_11820
   03400 DNA repair and recombination proteins [BR:psi03400]
    S70_11820
Enzymes [BR:psi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     S70_11820
Messenger RNA biogenesis [BR:psi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     S70_11820
DNA repair and recombination proteins [BR:psi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      S70_11820
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII HHH
Other DBs
NCBI-ProteinID: AFH94211
UniProt: A0A140NMS5
Position
2539583..2541409
AA seq 608 aa
MSTAEVISQFSLAESILNNTFGYQSFRPGQEAVIRAILDNRDCLVLMPTGGGKSLCYQVP
ALVKEGVTLVVSPLISLMKDQVDQLRLHGIKAACLNSSQTAQEQRDVMALCAEGAIKLLY
VAPERLLTDYFLSQLSSWNISLLAVDEAHCVSQWGHDFRPEYRAIGQLRQHFPDVPIMAL
TATADETTRADIVRLLALHDPLIQISSFDRPNIRYTLVEKYKPLDQLWFFIKAQKGKAGI
VYCNSRSKVEETAERLQKRGLSVAAYHAGLDNQQREWVQDAFLKDNLQIVVATVAFGMGI
NKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADMAWLRRCLEEKPAGLQ
QDIERHKLNAIAAFAEAQTCRRLVLLNYFGENRQAPCGNCDICLDPPKQYDGLVDAQKAL
SCIYRVGQRFGIGYIVEVLRGANNQRIRELGHDKLPVYGIGKDQSHEHWVSVIRQLIHLG
MITQNITHFSALQLTEAARPILRGESALQLAVPRVLVAKSRNQQSKVYRGNYDKKLFAKL
RKLRKSIADEENIPPFVVFNDATLIEMAEHCPASPSELLLINGVGEKKLERFGDAFMTLI
RDHLEGYE
NT seq 1827 nt   +upstreamnt  +downstreamnt
gtgtctacagctgaagtgatctcccagttttcactggctgaaagtatactcaataatact
tttggttatcagtctttccgccctgggcaggaagctgttattcgtgccatactcgataac
cgcgattgtttggtgcttatgccaactgggggcggtaaatcgctatgttatcaagttcct
gctctggttaaagagggggtaacgctggtggtatcgcctttgatctccctaatgaaagat
caggtcgaccaattacgccttcatggtatcaaagcagcttgtttaaactcctctcaaacc
gctcaagagcagcgagacgtgatggccttatgcgccgaaggcgccatcaagttgctgtat
gttgcgcccgaaaggttattaactgactattttcttagccagctgagtagttggaatatc
agtttattggcggtggatgaagcacactgtgtttcgcaatgggggcatgattttcgtcct
gagtatcgcgccattggtcagttacggcagcacttccctgatgttcctatcatggcatta
acggcaacagcagatgaaacgacacgagccgatatcgtacgtttattggccttacatgac
cctttgatacaaatcagcagttttgatagacccaatatccgctataccttagtcgaaaaa
tataaaccgcttgatcagctttggttctttatcaaagcacaaaaaggtaaagcgggtatt
gtctattgcaatagccgtagcaaagtggaagaaacggcagagcgtctgcaaaaacgtggg
ttaagcgttgcagcttatcatgcagggttagataaccaacaacgagagtgggtacaagat
gcttttttaaaagataacctacaaattgttgtggcaacagtggcttttggtatggggatc
aacaagtccaatgtgcgctttgtggcgcattttgatatccctcgcaatatcgaggcctat
tatcaagaaacagggcgagcaggtcgcgatggggttgaagcggaagccgtactattttat
gaccctgcggatatggcatggctacgccgctgtcttgaagagaaacccgctggcttgcag
caggatattgagcgccataagttgaatgcgatagctgcatttgcggaggctcaaacttgc
cgccgattagtgctgctcaattattttggtgaaaataggcaagcgccgtgtggcaattgt
gatatctgtttagacccgccaaaacagtatgatgggctagtggatgcccaaaaagcgcta
tcttgtatttaccgtgttggtcagcgttttggtattggttatattgttgaggtcttgcgc
ggggcaaacaatcagcgcatccgcgagctaggccatgataaattaccggtatatggcatc
ggtaaagatcaatcccatgagcattgggtcagcgttatccgccagttgatccatcttggg
atgatcacacaaaatattacgcatttttcagcgttgcaattaacggaagcagctaggccg
atattacgcggcgaatccgctttgcaacttgctgttcctcgtgttttggtggcaaaaagc
cgtaatcagcaaagcaaagtttatcgaggaaactatgataagaagttatttgctaagttg
cgcaaattgcgtaaatctatagcagacgaagagaatattcctccattcgttgtgtttaat
gatgcaaccctgattgagatggctgagcattgtccggcttccccttcagaattgttgtta
attaatggtgtgggggagaaaaagcttgaacgctttggtgatgcttttatgacattgatt
agggaccatcttgaaggttacgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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