KEGG   Pseudomonas stutzeri DSM 10701: PSJM300_01425Help
Entry
PSJM300_01425     CDS       T02182                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psj  Pseudomonas stutzeri DSM 10701
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psj00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PSJM300_01425
Enzymes [BR:psj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PSJM300_01425
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PSJM300_01425
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
306867..307679
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIEPHLAGRRVSRVIVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL
LIKAQAGTLIAHLGMSGSLRLVDGELPAEKHEHVDILLETGMALRYTDPRRFGALLWSED
PLNHVLLASLGPEPLGDDFDGDRLFRLSRGRSMAIKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRAAGIVSRARYLKLAEAIRQILAQAIECGGTTLRDFVGGDGKPGYFQQELFVYGR
GGEFCKRCGAGLREVRLGQRASVFCGGCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaacttcccgaagtcgaaaccacccgccgcggtatcgagccgcatctcgccggc
cggcgtgtcagccgtgtgatcgtgcgtgagcggcgcctgcgctggccgattccggaagac
ctggatgtgcgcctgtccggccagcgtatcgaggcggtcgagcggcgcgccaagtacctg
ttgatcaaggcgcaggccggcacgctgatcgctcatctgggcatgtccggcagcctgcgg
ctggtggatggcgagctgccggcggaaaagcacgagcacgtcgatatcctgctggaaacg
ggcatggccctgcgctacaccgacccacgccgcttcggcgcgctgctctggagcgaagat
ccgctcaatcatgtgctgctcgccagcctggggccggagccgctgggcgacgatttcgat
ggtgaccggctgtttcgcctgtcgcgcgggcgcagcatggcgatcaagccgttcatcatg
gacaacgccgtggtggtgggcgtcggcaacatctacgctagcgaagcgctgttcgccgcc
ggcatcgatccgcgtcgtgccgccgggatcgtttcccgggcacgctacctgaagctcgcc
gaggcgatccggcagattctcgcccaggccatcgagtgcggaggcaccaccctgcgcgat
ttcgtcggcggcgacggcaagccgggctacttccagcaggaactgttcgtctatggtcgt
ggtggggagttctgcaagcgttgcggggcaggtctgcgcgaggttcgcctggggcagcgg
gcgagcgtgttctgtggtggctgtcagcgctga

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