KEGG   Stutzerimonas stutzeri DSM 10701: PSJM300_11270
Entry
PSJM300_11270     CDS       T02182                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
psj  Stutzerimonas stutzeri DSM 10701
Pathway
psj03030  DNA replication
psj03430  Mismatch repair
psj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSJM300_11270
   03430 Mismatch repair
    PSJM300_11270
   03440 Homologous recombination
    PSJM300_11270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psj03032]
    PSJM300_11270
   03400 DNA repair and recombination proteins [BR:psj03400]
    PSJM300_11270
Enzymes [BR:psj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSJM300_11270
DNA replication proteins [BR:psj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSJM300_11270
DNA repair and recombination proteins [BR:psj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSJM300_11270
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_14 ResIII AAA_19 DUF3646 AAA_30 AAA_18 TIP49 AAA_2 PIF1 TsaE nSTAND3 AAA_7 Rad17 AAA_24 zf-CXXC SKI HasA Herpes_Helicase
Other DBs
NCBI-ProteinID: AFN78318
Position
complement(2477508..2479511)
AA seq 667 aa
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGVSSTPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLTHVLGAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAEDVRSM
LGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWGGVLAEILNVLHRVAIAQALPE
AVDNGQGDRERVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
AGDESAPRTPLKSLGISPATTDSEAAPVAARPAAPVAAAAPPPVPVVEPVVTAAAPVTPA
AAPVMSQPAVVAEQPAPQSASDTVAPPIDLPWEEPAAPAVAVAESAQATPGEALAELPEP
SVAVVPADDYDDDEPPLSDEDYFEAETQAEVYLHGLDEAQAETSTAEPEPAMEPATGLAA
EWQDIYLKLGLSGLTGSIASNCTLISVEDDRWLMHLDPAQSALFNATQQRRLNDALSQYH
GRTLQLVIELERPRQETPAQAAARRRAERQRAAEQSIQSDPVVQQLMEQFAAVIREGTIE
PVEHSEP
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgagttatcaggttctagcccgaaaatggcgtccgcgctcgttccgcgaaatggtcggg
cagacgcatgtgctcaaggccctgatcaacgcgctggacagccagcgcctgcaccacgcc
tacctgttcaccggcacacgcggggtgggcaagaccaccatcgcgcggatcatcgccaag
tgcctgaactgcgaaaccggcgtcagctccacgccttgcgggcaatgttcggtatgccgt
gagatcgacgagggccgtttcgtcgacctgatcgaagtcgacgccgcgagccgcaccaag
gtcgaagacacccgcgagctgctggacaacgtgcagtacgcgcccagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgtcgcactccttcaacgcgctgctg
aagacgctggaagagccgccgccgcacgtcaagttcctgctggccaccaccgatccgcag
aagctgcccgtcaccatcctttcgcgttgcctgcagttctcgctgaagaacatgccgccg
gaaagggtggtcgagcacctgacccatgtgctgggggcggaaaacgtacccttcgagccg
gatgcgctctggctgctcggccgcgccgccgacggctcgatgcgcgatgccatgagcctg
accgaccaggcgatcgcctttggcgagggcaaggtgctcgccgaggacgtgcgcagcatg
ctcggcaccctggatcatggccaggtctatggcgtgttgcaggcattgctggaaggcgat
gcccgtgccttgctggaggcggtgcgacatctggcggagcagggccccgactggggcgga
gtgctggccgagatactcaatgtgctgcaccgtgtcgccatcgcccaggcgttgcccgag
gcggtggacaacggccagggcgatcgcgaacgcgtgctggcgctggcccaggcgctgccc
gccgaagacgtacagttctactaccagatgggcctgatcggccgccgcgatctgccgttg
gcgcccgacccgcgcagcggtttcgagatggttctgctgcggatgctcgcgtttcgtccg
gccggtgatgaaagcgcaccacgaacacccctaaagagccttggaatcagcccggccacg
actgattccgaagcggcaccggtggccgccaggcctgccgccccggtcgctgcggcagca
ccgccgccagtgccggtagtcgagccggttgtcaccgctgcggcaccggtgacaccagct
gctgcgccggtcatgtcgcagccagcggtcgttgccgagcagccggcaccgcaatcggcc
tccgatacagtggccccgcccatcgatcttccttgggaagagcctgcggctccggcagtg
gcggtcgcagaatccgcgcaggctacgccgggcgaggcactcgccgaattgcccgagcct
tccgtcgcggtggtgccagccgacgactacgacgatgatgagccgccactgagcgacgag
gattatttcgaagccgaaacccaggccgaggtctatctgcacggtctggacgaggctcag
gccgaaacgtcgactgccgaaccggagcctgccatggagccggctaccggtttggcggcc
gaatggcaagacatctatctcaagcttggtctgtccggcctgaccggcagcatcgcctcg
aactgcacgctgatttcggtcgaggacgatcgctggctgatgcacctggacccggcgcag
agcgccttgttcaacgcaacgcagcagcggcgtctgaacgatgcgctcagccagtatcac
ggccgaacgttgcagttggtgatcgaactggaaaggcctcggcaggagactccggcccag
gccgcggctcggcggcgtgcggagcggcagcgagcggcggagcagtcgattcaatccgat
ccggtcgtccagcaactgatggaacagttcgcggcggttatacgcgaaggcaccatcgaa
cccgtagaacattccgaaccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system