KEGG   Pseudomonas sp. TKP: U771_29990Help
Entry
U771_29990        CDS       T02969                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psk  Pseudomonas sp. TKP
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psk00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    U771_29990
Enzymes [BR:psk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     U771_29990
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     U771_29990
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6560758..6561570)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHELLLRLGPEPLTELFDGERLFQLSRGKSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGGISRGRYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGSELRNVVLGQRASVFCPKCQS
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagttacctgaagtcgaaaccacccggcgcgggatcgcgccgcacctggaaggc
cagcgggtcagccgcgtcgtggtgcgcgaacggcgcctgcgctggccgatcccggaagac
ctggatgtgcgcctgtccgggcagcgcatcgtgctggtggaacgacgggccaagtacctg
ttgatcaacgccgaagtgggcaccttgatcagccacctgggcatgtccggtaacctgcgc
ttggtggaggtcggcatgccggcggccaagcatgagcatgtggacatcgagcttgaatcc
ggcctggccctgcgttacaccgaccctcggcgtttcggcgcaatgctctggagccaggac
ccgcataaccacgaactgctgctgcgcctggggccggagccgttgaccgagctgttcgac
ggtgagcgtttgtttcaactgtctcgcggcaagtcgatggcggtgaaaccgttcatcatg
gacaacgcggtggtggtcggcgtgggcaatatctatgcgactgaggcgttgtttgcggcg
gggattgatccgcgtcgcgccgccggcggcatttcacgcgggcgttatttgaagctggcg
atcgagatcaagcgcattctggcggcggcgatcgagcgtggcggcaccacgttgcgcgac
tttatcggcggtgacgggcagccggggtatttccagcaggaattgttcgtctacggccgg
ggtggcgaggcgtgcaaggtctgtgggagcgaattgcgcaacgtggtgctggggcaacgg
gcgagtgtgttttgccccaagtgccagagttga

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