KEGG   Pirellula staleyi: Psta_3812Help
Entry
Psta_3812         CDS       T01147                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
psl  Pirellula staleyi
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:psl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psta_3812
Enzymes [BR:psl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psta_3812
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psta_3812
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4959386..4960240
Genome map
AA seq 284 aa AA seqDB search
MPELPEVETMRRGILKATGATIVDVQLEPCARRPIAIKPSLAVVQKSLIGTKISAIERLG
KRVVVRAGDDFHLILEPRMTGLVLVSDPPSREHLRLRIDLAGSVLPSIWYWDRRGLGSIQ
LYRTAELEAQLLSGKLGPDALAISKDDFSARLKRTSRAIKVALLDQQIVAGVGNLYASEI
LHLAAIDPKCRANKLTRQQLDLLHDKMLEVLHTAILHEGSTLSDGTYRNALAQAGNYQNM
HRVYDREHEPCPTCLSPIQRIVQAQRSTFFCAACQRPSRKKPLK
NT seq 855 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactacccgaagtcgaaacgatgcggcgtggcatcttgaaagcaactggcgcc
acgattgtcgacgtccagctcgaaccgtgcgcgaggcgtcccatcgcgatcaaaccgtca
ctcgcagtggttcaaaaatcgctcatcggaaccaagatcagtgcgatcgaacgcctggga
aaacgtgtggtggtgcgcgcgggggacgattttcacctgatcctcgagccgcgcatgacg
ggactcgtgctggtgagcgatcctccgtcgcgcgagcatctacgacttcgcatcgatctc
gccgggagcgtgctcccttcgatttggtactgggatcggcgcgggcttgggagtattcag
ctctaccgcacggcggaactcgaagcgcaactgctctcaggaaaactgggacccgacgcg
cttgcgatttcgaaggacgatttctccgcgaggctgaagcggacgagtcgagccatcaag
gttgcgctgctcgatcagcagatcgtcgcgggagtaggcaatctgtatgcttccgagatt
ttgcatctagcagcgatcgatcccaagtgtcgcgcgaataaactgacgcgacagcagctc
gacctgcttcacgacaagatgctcgaggtacttcataccgccattttgcatgaaggttcg
accttgtccgatggcacttatcgcaacgcacttgcacaggctggcaactaccagaatatg
caccgagtttacgatcgcgagcacgaaccttgcccaacgtgcctgtcacccattcagcgc
attgtgcaagcccagcggtcgacctttttttgcgcagcttgtcagcgtccctctcgtaaa
aaacctctgaaataa

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