KEGG   Pseudoalteromonas sp. SM9913: PSM_A1980
Entry
PSM_A1980         CDS       T01374                                 
Symbol
miaB
Name
(GenBank) involved in methylthiolation of isopentenylated A37 derivatives in tRNA, Fe-S protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
psm  Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:psm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psm03016]
    PSM_A1980 (miaB)
Enzymes [BR:psm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     PSM_A1980 (miaB)
Transfer RNA biogenesis [BR:psm03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    PSM_A1980 (miaB)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM B12-binding TRAM_2
Other DBs
NCBI-ProteinID: ADT68903
Position
I:2124359..2125765
AA seq 468 aa
MNEYDSQKMADLLDATNGYQLTEEAADADVILLNTCSIREKAQEKVFHQLGRWKLLKDDK
PDLIIGVGGCVASQEGDSIRQRAPFVDVIFGPQTLHRLPEMIKQVQGNKGSSVVDISFPE
IEKFDRLPEPKAEGPSAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQG
VREVNLLGQNVNAYRGDTHDGEICYFSDLIRLVAAIDGIDRIRYTTSHPVEFTPDIIDAY
ADVPELVDHLHLPVQSGSDRVLNLMKRGHTALEYKSTIRKLRKIRPNLSMSSDFIIGFPG
ESKADFEATMNLINDIGFDMSFSFIYSARPGTPAADLPDDVTEQEKKERLYLLQNRITQM
AQQISRQMFDTEQRILVEGPSKKNPMELRGRTENNRVVNFVGPHTVIGQFVDVRITEALP
NSLRGDLIRTESEMNLRREIAPSAILTKAASEQKTETANEIGVATFVP
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaacgaatacgactctcagaaaatggctgatcttctagatgcgaccaacggctatcag
ctaactgaagaagctgctgatgctgatgttatattacttaacacctgttcaattcgtgaa
aaagcgcaagaaaaagtattccaccaattaggtcgttggaagttattaaaagatgacaaa
ccagacctgattattggtgttggcggctgtgtagcatcgcaagaaggcgattcaattcgt
caacgcgcgccgtttgtcgatgttatttttggtccacaaactttgcaccgtttacctgaa
atgatcaaacaagtgcaaggtaacaaagggtcatcagtggttgatatttcattcccagag
attgaaaaatttgaccgtcttcctgagccaaaagcagaaggtccttctgcgtttgtatca
attatggaagggtgttctaaatactgtactttctgtgttgtaccttacacgcgtggtgaa
gaagtaagtcgccctgttgatgacgtgttattagaggttgcacagttagccgagcaaggc
gtacgtgaagttaacttactaggtcaaaacgtaaatgcgtaccgtggtgatacacacgat
ggtgaaatttgctatttctcagaccttatccgtttagtagccgcaattgacgggattgac
cgtattcgttacaccacttcacaccccgttgagtttacgcctgacattattgatgcgtat
gccgatgtaccagagctggttgatcacttacaccttccagtacaaagtggctcagatcgt
gttttaaacttaatgaaacgcggccatactgcacttgagtacaaatcaactattcgtaag
ctacgtaaaattcgccctaacttaagtatgtcgtcagatttcatcataggtttcccaggt
gaaagcaaggccgattttgaagcgaccatgaaccttatcaacgatattggttttgatatg
agctttagctttatttacagtgcacgcccaggtacgccagcggccgatttgccagatgac
gtaaccgagcaagagaaaaaagagcgcctgtacttattacaaaaccgtattacacaaatg
gcacagcaaattagccgccaaatgtttgataccgaacaacgtattttagttgaaggtcct
tctaagaagaacccaatggaattacgtggccgaactgaaaacaaccgtgtagttaacttt
gttggcccacacacagtgatcggtcagtttgttgatgtacgtattaccgaggcactacca
aactctttacgtggcgatttaattcgtacagaatcagaaatgaacttacgccgcgaaatt
gccccttctgctattttaaccaaagcagcgagtgagcaaaaaaccgagacagctaacgaa
attggcgttgctactttcgtaccttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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