KEGG T01374: PSM

Pseudoalteromonas sp. SM9913: PSM_B0529

Entry

PSM_B0529         CDS       T01374

Name

(GenBank) putative deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

psm Pseudoalteromonas sp. SM9913

Brite

KEGG Orthology (KO) [BR:psm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psm03400]
    PSM_B0529
Enzymes [BR:psm01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     PSM_B0529
DNA repair and recombination proteins [BR:psm03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PSM_B0529
Prokaryotic type
    PSM_B0529

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

ADT70566

Position

II:584105..585499

AA seq 464 aa
MNTLFWFRRDLRLFSNEALIEALNNGAKHTIFFVCEKQWAQHNTAPIQIDLLKRRVSYIR
EKLAEYGINLHVIEAPYFTDCQTKLLDFCQQYEIKHIIANKEYELNEFNRDKAIQAQCDQ
QQITFTLYEGDIIAPVGSVRTQNNEMYKVFTPFKRAWLKQYQDTHFSLVSWPLSSNPIDI
ESCELLSSDDSSKKWPVDDDTLASVVDNFIHDKLASYDDVRDIPSVKGTSGLSPYLALGV
VSSKQLMVNIQQQYPDILTTSKSKTFTWVNELIWREFYKHLIAEFPKLSRGANFNEKYDS
VAWRDNEAEFKLWCEGRTGYPLVDAAMQQLLQTGWMHNRLRMVVASFLTKHLLIDWRKGE
QFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPITQSERFDPSGQFIRKYLPELE
KVPDKHIHFPHTYLAATGQSEHCYWPAIVDHKAARARALDAFKV

NT seq 1395 nt +upstreamnt +downstreamnt
atgaatacactattttggtttaggcgtgatttgcgccttttttcaaacgaagcgcttatt
gaagcgttaaataatggtgctaaacacaccattttttttgtgtgcgaaaaacaatgggca
cagcataacactgccccaattcaaattgatttactaaaacgcagagtcagttacatacgt
gaaaaattagctgagtatggcattaatttacacgtgatagaggctccttatttcacagac
tgccaaactaagcttctcgatttttgtcagcagtatgagattaaacacataatagccaat
aaagaatatgagcttaatgagtttaatagagataaagcgattcaagcgcaatgcgatcaa
cagcaaataacatttactttatacgaaggtgacatcattgcacctgttggcagtgtacgc
actcaaaacaatgaaatgtataaagtgtttacgccttttaagcgggcgtggttaaaacag
tatcaagatactcactttagcttggtgtcgtggccattatcttcaaaccctattgatatt
gaatcgtgtgaattactcagcagtgatgacagttcaaagaaatggccggttgatgacgac
accttagcgagtgtggtcgataattttatccatgataaattagcaagttatgatgatgta
cgcgatatacctagtgtaaaaggaacatcgggtttaagcccatatttagcattaggggtt
gttagcagtaagcagttaatggtcaacatacaacagcagtatccagatattttgactacc
tcaaaaagtaaaacctttacgtgggtgaacgagctgatttggcgtgaattttataaacac
ctcattgccgaatttcctaaattatcgcgcggtgctaatttcaacgaaaagtacgatagt
gttgcttggcgtgataatgaggctgagtttaagctttggtgtgaaggccgcactggctat
ccacttgttgatgctgccatgcaacagctattgcaaactggttggatgcacaaccgtttg
cgaatggtagtggcaagtttcttaactaaacatcttttaatcgactggcgtaagggcgag
cagttttttatgcagcaccttattgatggtgatttagcctcgaataatggcggctggcaa
tgggcggcaagtacaggctgtgatgcacagccttattttagagtgtttaaccctattact
caaagtgaacgctttgatccaagtggtcaatttattcgtaaatatctgcctgaattagaa
aaagtcccagataaacacattcattttcctcatacctatttagcagcaacggggcaaagt
gaacactgttactggccggcaattgttgatcataaagcagcacgagctagggctttagat
gcatttaaggtgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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