KEGG T02715: PSYCG

Psychrobacter sp. G: PSYCG_10350

Entry

PSYCG_10350       CDS       T02715

Name

(GenBank) topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

pso Psychrobacter sp. G

Brite

KEGG Orthology (KO) [BR:pso00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pso03032]
    PSYCG_10350
   03400 DNA repair and recombination proteins [BR:pso03400]
    PSYCG_10350
Enzymes [BR:pso01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PSYCG_10350
DNA replication proteins [BR:pso03032]
Prokaryotic type
  DNA Topoisomerases
   PSYCG_10350
DNA repair and recombination proteins [BR:pso03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PSYCG_10350

SSDB

Motif

Pfam:

Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom zf-TFIIB Toprim_4 Toprim_2 O-FucT Toprim_C_rpt

Other DBs

NCBI-ProteinID:

AGP49552

Position

complement(2382334..2385024)

AA seq 896 aa
MTKPAAKKSAAPAADKPKGSPKASPKGKSLVIVESPAKAKTINKYLGDDFIVRSSIGHVR
DLPVGASKSAKKPATTKKDDSLSKEEKTQQALVRRMGVDPEHDWAAVYEVLPNKTKVIKE
LKALAKDADKIYLATDMDREGEAIAWHLKEVIGGADSKYERVVFNEITKSAIQNAFKQPS
KLDIDRVNAQQARRFLDRVVGFMVSPLLWQKVARGLSAGRVQSVAMRLVVEREHEIRAFI
PEEYWQIHADTHIAESKAKKAADAEQIGIRLEATKQGGKTLKLVNKEQTDKVLDVLKAND
FIVKEREEKPTQSKPSAPFITSTLQQAASTRLGFSVKKTMILAQRLYEAGHITYMRTDST
FLSGDALAAVRGYIEDSYGAKYVPEKPNFYGNKQGAQEAHEAIRPSNVNMKSTQLKAVER
DAIRLYELIWRQFVACQMLPAKYLSVNLFVAADDVELKARGRTLVFDGYTKVMPPAKTDD
NLLPDVKKGDKLIVDKLDPSQHFTKPPPRFTEASLVKELEKKGIGRPSTYASIISTIQDR
GYVKLENKRLFAEKMGDIVTDRLTASFPDLMDYTFTAALEDKLDHVAEGDTDWKDVLDNF
YGDFKTTLDRAKEKDGMRPNDPTDVPDVHCDLCARPMQLRTGSTGVFLGCTGYNLPPKER
CKGTKNLMPVEAFANLDDAEGDDEAAEVRDLMEKKRCPKCGTAMNGYIVDGGLKLHVCGN
NPDCDGYVLEEGKFEVPGSDSPTIDCNKCDGQMELKTGRFGPYFACQQCDNTRKVLKTGE
AAPPRMDPIHLPELKSVKHEDYFILREGAAGMFLAASKFPKVRETRPPKLAELREIKDKM
EDKFQYLFAGPDEDPDGNPTILRWSRKKKEQYIGSEKNGKATRWGVYWRKGEWVEE

NT seq 2691 nt +upstreamnt +downstreamnt
atgacaaaacccgcagctaaaaaaagtgcagcgcccgctgctgacaaacctaaaggcagc
ccgaaagccagtccaaagggcaaatctttggtaattgttgaatcacccgccaaggcaaaa
accatcaataaatacttgggtgatgattttatcgtgcgctcaagtatcggtcatgtccga
gatttgccagtcggtgcaagtaaaagcgcaaagaaaccagcaacgaccaaaaaagatgac
agtctaagcaaagaagaaaaaacccagcaagcattggtacggcgtatgggtgtcgaccct
gagcatgattgggcggcagtctatgaagttttgccaaataagaccaaggtcatcaaggag
ctgaaagctttagccaaagatgctgacaaaatctatctggcaacggatatggatagagag
ggagaggcgattgcttggcatcttaaagaagtcatcggcggcgctgacagtaagtatgag
cgtgtggtttttaacgagattaccaaatctgccattcaaaatgcctttaagcaaccgtct
aaacttgatattgaccgagttaatgcacagcaagcgcggcgttttttagatcgtgtcgtt
ggttttatggtatcgccacttttgtggcaaaaggttgctcgtggtctatcggcgggtcgc
gtgcagtcagttgccatgcgcttggttgttgagcgtgagcatgaaatccgcgcctttatt
ccagaagagtattggcagattcatgccgatacccatattgctgagagcaaagccaaaaaa
gctgcagacgctgagcaaattggtattcgtttagaagccactaagcaaggcggcaaaacg
ctaaagctcgtcaataaagagcagaccgataaagtattagatgtcctaaaagcaaatgac
tttatcgtcaaagaacgtgaagagaagccaacgcagtcgaaaccaagtgcgccttttatt
acctcgactttgcaacaagccgccagcacgcgtctgggattctcagttaagaaaaccatg
attttagcgcaacgtttatatgaagcgggtcacattacttatatgcgtaccgattcgacc
tttttatcaggtgatgcgcttgctgcggtacgtggctatatcgaagacagctatggtgcg
aaatacgtgccagaaaagccgaatttctatggtaataaacaaggcgcacaagaagcgcat
gaagccatacgtccgtctaacgtcaatatgaagtcaacgcagcttaaggccgttgaacgt
gatgcaatacgtttgtatgagctaatctggcgtcagtttgtggcctgtcagatgctacca
gcaaaatatctatcagtgaatttattcgttgctgctgacgacgttgagttaaaagcacgc
ggtcgtaccttggtatttgatggctatactaaagtgatgccacctgccaagaccgacgat
aacttattaccagatgtgaaaaaaggcgataaattaatagtagataagcttgatccgagt
caacattttaccaagccgccaccgcgttttactgaggcaagcttggtcaaagagcttgag
aaaaaaggcatcggtcgtccatcgacctatgcttctatcatctctactattcaagatcgc
ggttatgtaaagctcgaaaacaagcgcctgtttgctgaaaaaatgggtgatatcgtcacc
gacagactgaccgcaagttttcctgatttgatggattatacttttactgctgcgctagag
gacaagcttgatcatgttgcagaaggcgataccgattggaaagatgtgctcgataatttc
tatggcgacttcaagacaacgcttgatcgtgctaaagaaaaagacggcatgcgcccgaat
gatccaaccgatgtaccagatgtccattgcgatctttgtgctcgtccaatgcagctacgt
accggttcgacgggtgtattcttaggttgtactggttataacttaccaccaaaagagcgc
tgtaaaggcactaagaacttaatgccagtcgaagcttttgccaatcttgatgatgccgaa
ggtgatgacgaagcggccgaagtcagagatttgatggagaagaaacgctgcccgaaatgc
ggtacggcaatgaatggttatatcgttgatggcggtctgaagctgcatgtgtgtggtaac
aatcctgattgtgatggttatgtcttagaagaaggtaagttcgaagtgcctggctctgac
tctccaaccattgactgtaataagtgcgatggacaaatggagctaaagacgggacgtttt
ggtccttactttgcttgccagcaatgtgataacacgcgtaaagtgctgaaaacaggcgaa
gcagcaccgccgcgcatggatcctatccatctaccagagttaaaatctgttaagcatgaa
gattactttatcttacgtgaaggcgcagcgggcatgttcttagcagcctctaagttccct
aaagtacgggagacacgtccgccaaagcttgctgagctgcgagagattaaagataaaatg
gaagacaagttccagtatttgtttgcaggaccagatgaagatccagatggtaatccgacg
attttacgttggtcgcgcaagaaaaaagagcagtatatcggctctgagaaaaatggcaaa
gccacacgttggggcgtttactggcgtaaaggcgagtgggtagaggagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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